Combination therapy for lysosomal storage diseases

ABSTRACT

This invention provides various combinations of enzyme replacement therapy, gene therapy, and small molecule therapy for the treatment of lysosomal storage diseases.

This application is a continuation application of U.S. patentapplication Ser. No. 11/762,689, filed Jun. 13, 2007 (pending), which isa divisional of U.S. patent application Ser. No. 09/884,526, filed Jun.19, 2001 (abandoned), which claims the benefit of U.S. ProvisionalApplication No. 60/212,377, filed Jun. 19, 2000, all of which areincorporated herein by reference.

1. FIELD OF THE INVENTION

The present invention relates generally to the field of therapeutics forlysosomal storage diseases. More specifically, the invention relates tovarious combinations of enzyme replacement therapy, gene therapy, andsmall molecule therapy for the treatment of lysosomal storage diseases.

2. BACKGROUND OF THE INVENTION

Each of the over thirty known lysosomal storage diseases (LSDs) ischaracterized by a similar pathogenesis, namely, a compromised lysosomalhydrolase. Generally, the activity of a single lysosomal hydrolyticenzyme is reduced or lacking altogether, usually due to inheritance ofan autosomal recessive mutation. As a consequence, the substrate of thecompromised enzyme accumulates undigested in lysosomes, producing severedisruption of cellular architecture and various disease manifestations.

2.1 Lysosomal Storage Diseases

Gaucher's disease, first described by Phillipe C. E. Gaucher in 1882, isthe oldest and most common lysosomal storage disease known. Type 1 isthe most common among three recognized clinical types and follows achronic course which does not involve the nervous system. Types 2 and 3both have a CNS component, the former being an acute infantile form withdeath by age two and the latter a subacute juvenile form. The incidenceof Type 1 Gaucher's disease is about one in 50,000 live births generallyand about one in 400 live births among Ashkenazim (see generally Kolodnyet al., 1998, “Storage Diseases of the Reticuloendothelial System”, In:Nathan and Oski's Hematology of Infancy and Childhood, 5th ed., vol. 2,David G. Nathan and Stuart H. Orkin, Eds., W.B. Saunders Co., pages1461-1507). Also known as glucosylceramide lipidosis, Gaucher's diseaseis caused by inactivation of the enzyme glucocerebrosidase andaccumulation of glucocerebroside. Glucocerebrosidase normally catalyzesthe hydrolysis of glucocerebroside to glucose and ceramide. In Gaucher'sdisease, glucocerebroside accumulates in tissue macrophages which becomeengorged and are typically found in liver, spleen and bone marrow andoccasionally in lung, kidney and intestine. Secondary hematologicsequelae include severe anemia and thrombocytopenia in addition to thecharacteristic progressive hepatosplenomegaly and skeletalcomplications, including osteonecrosis and osteopenia with secondarypathological fractures.

Fabry disease is an X-linked recessive LSD characterized by a deficiencyof α-galactosidase A (α-Gal A), also known as ceramide trihexosidase,which leads to vascular and other disease manifestations viaaccumulation of glycosphingolipids with terminal α-galactosyl residues,such as globotriaosylceramide (GL-3) (see generally Desnick R J et al.,1995, α-Galactosidase A Deficiency: Fabry Disease, In: The Metabolic andMolecular Bases of Inherited Disease, Scriver et al., eds., McGraw-Hill,New York, 7^(th) ed., pages 2741-2784). Symptoms may include anhidrosis(absence of sweating), painful fingers, left ventricular hypertrophy,renal manifestations, and ischemic strokes. The severity of symptomsvaries dramatically (Grewal R P, 1994, Stroke in Fabry's Disease, J.Neurol. 241, 153-156). A variant with manifestations limited to theheart is recognized, and its incidence may be more prevalent than oncebelieved (Nakao S, 1995, An Atypical Variant of Fabry's Disease in Menwith Left Ventricular Hypertrophy, N. Engl. J. Med. 333, 288-293).Recognition of unusual variants can be delayed until quite late in life,although diagnosis in childhood is possible with clinical vigilance (KoY H et al., 1996, Atypical Fabry's Disease—An Oligosymptomatic Variant,Arch. Pathol. Lab. Med. 120, 86-89; Mendez M F et al., 1997, TheVascular Dementia of Fabry's Disease, Dement. Geriatr. Cogn. Disord. 8,252-257; Shelley E D et al., 1995, Painful Fingers, Heat Intolerance,and Telangiectases of the Ear: Easily Ignored Childhood Signs of FabryDisease, Pediatric Derm. 12, 215-219). The mean age of diagnosis ofFabry disease is 29 years.

Niemann-Pick disease, also known as sphingomyelin lipidosis, comprises agroup of disorders characterized by foam cell infiltration of thereticuloendothelial system. Foam cells in Niemann-Pick become engorgedwith sphingomyelin and, to a lesser extent, other membrane lipidsincluding cholesterol. Niemann-Pick is caused by inactivation of theenzyme sphingomyelinase in Types A and B disease, with 27-fold moreresidual enzyme activity in Type B (see Kolodny et al., 1998, Id.). Thepathophysiology of major organ systems in Niemann-Pick can be brieflysummarized as follows. The spleen is the most extensively involved organof Type A and B patients. The lungs are involved to a variable extent,and lung pathology in Type B patients is the major cause of mortalitydue to chronic bronchopneumonia. Liver involvement is variable, butseverely affected patients may have life-threatening cirrhosis, portalhypertension, and ascites. The involvement of the lymph nodes isvariable depending on the severity of disease. Central nervous system(CNS) involvement differentiates the major types of Niemann-Pick. Whilemost Type B patients do not experience CNS involvement, it ischaracteristic in Type A patients. The kidneys are only moderatelyinvolved in Niemann Pick disease.

The mucopolysaccharidoses (MPS) comprise a group of LSDs caused bydeficiency of enzymes which catalyze the degradation of specificglycosaminoglycans (mucopolysaccharides or GAGs) known as dermatansulfate and heparan sulfate. GAGs contain long unbranchedpolysaccharides characterized by a repeating disaccharide unit and arefound in the body linked to core proteins to form proteoglycans.Proteoglycans are located primarily in the extracellular matrix and onthe surface of cells where they lubricate joints and contribute tostructural integrity (see generally Neufeld et al., 1995, TheMucopolysaccharidoses, In: The Metabolic and Molecular Bases ofInherited Diseases, Scriver et al., eds., McGraw-Hill, New York, 7^(th)ed., pages 2465-2494).

The several mucopolysaccharidoses are distinguished by the particularenzyme affected in GAG degradation. For example, MPS I (Hurler-Scheie)is caused by a deficiency of α-L-iduronidase which hydrolyzes theterminal α-L-iduronic acid residues of dermatan sulfate. Symptoms in MPSI vary along a clinical continuum from mild (MPS IS or Scheie disease)to intermediate (MPS IHS or Hurler-Scheie disease) to severe (MPS IH orHurler disease), and the clinical presentation correlates with thedegree of residual enzyme activity. The mean age at diagnosis for Hurlersyndrome is about nine months, and the first presenting symptoms areoften among the following: coarse facial features, skeletalabnormalities, clumsiness, stiffness, infections and hernias (Cleary M Aand Wraith J E, 1995, The Presenting Features of MucopolysaccharidosisType 1.1-1 (Hurler Syndrome), Acta. Paediatr. 84, 337-339; Colville G Aand Bax M A, 1996, Early Presentation in the MucopolysaccharideDisorders, Child: Care, Health and Development 22, 31-36).

Other examples of mucopolysaccharidoses include Hunter (MPS II oriduronate sulfatase deficiency), Morquio (MPS IV; deficiency ofgalactosamine-6-sulfatase and β-galactosidase in types A and B,respectively) and Maroteaux-Lamy (MPS VI or arylsulfatase B deficiency)(see Neufeld et al., 1995, Id.; Kolodny et al., 1998, Id.).

Pompe disease (also known as glycogen storage disease type II, acidmaltase deficiency and glycogenosis type II) is an autosomal recessiveLSD characterized by a deficiency of α-glucosidase (also known as acidα-glucosidase and acid maltase). The enzyme α-glucosidase normallyparticipates in the degradation of glycogen to glucose in lysosomes; itcan also degrade maltose (see generally Hirschhorn R, 1995, GlycogenStorage Disease Type II: Acid α-Glucosidase (Acid Maltase) Deficiency,In: The Metabolic and Molecular Bases of Inherited Disease, Scriver etal., eds., McGraw-Hill, New York, 7^(th) ed., pages 2443-2464). Thethree recognized clinical forms of Pompe disease (infantile, juvenileand adult) are correlated with the level of residual α-glucosidaseactivity (Reuser A J et al., 1995, Glycogenosis Type II (Acid MaltaseDeficiency), Muscle & Nerve Supplement 3, S61-S69).

Infantile Pompe disease (type I or A) is most common and most severe;characterized by failure to thrive, generalized hypotonia, cardiachypertrophy, and cardiorespiratory failure within the second year oflife. Juvenile Pompe disease (type II or B) is intermediate in severityand is characterized by a predominance of muscular symptoms withoutcardiomegaly. Juvenile Pompe individuals usually die before reaching 20years of age due to respiratory failure. Adult Pompe disease (type IIIor C) often presents as a slowly progressive myopathy in the teenageyears or as late as the sixth decade (Felice K J et al., 1995, ClinicalVariability in Adult-Onset Acid Maltase Deficiency: Report of AffectedSibs and Review of the Literature, Medicine 74, 131-135).

In Pompe, it has been shown that α-glucosidase is extensively modifiedpost-translationally by glycosylation, phosphorylation, and proteolyticprocessing. Conversion of the 110 kilodalton (kDa) precursor to 76 and70 kDa mature forms by proteolysis in the lysosome is required foroptimum glycogen catalysis.

2.2 Therapies for Lysosomal Storage Diseases

Several approaches are being used or pursued for the treatment of LSDs,most of which focus on gene therapy or enzyme replacement therapy foruse alone in disease management. Additionally, researchers haveidentified a number of small molecules for use alone in the managementof LSDs. Other, disease-specific approaches, are also underconsideration.

Gene Therapy

Replacement of the defective enzyme in a patient with Fabry Disease isconsidered feasible using a recombinant retrovirus carrying the cDNAencoding α-Gal A to transfect skin fibroblasts obtained from Fabrypatients (Medin J A et al., 1996, Correction in Trans for Fabry Disease:Expression, Secretion, and Uptake of α-Galactosidase A inPatient-Derived Cells Driven by a High-Titer Recombinant RetroviralVector, Proc. Natl. Acad. Sci. USA 93, 7917-7922).

In vitro studies have also suggested that gene therapy may be feasiblein Pompe disease. Vectors are being developed from both recombinantretrovirus and recombinant adenovirus (Zaretsky J Z et al., 1997,Retroviral Transfer of Acid α-Glucosidase cDNA to Enzyme-DeficientMyoblasts Results in Phenotypic Spread of the Genotypic Correction byBoth Secretion and Fusion, Human Gene Therapy 8, 1555-1563; Pauly D F etal., 1998, Complete Correction of Acid α-Glucosidase Deficiency in PompeDisease Fibroblasts in Vitro, and Lysosomally Targeted Expression inNeonatal Rat Cardiac and Skeletal Muscle, Gene Therapy 5, 473-480).

Additionally, transfer and expression of the normal α-L-iduronidase geneinto autologous bone marrow by retroviral gene transfer has also beendemonstrated in non-clinical studies of Hurler Syndrome (Fairbairn etal., 1996, Long-Term in vitro Correction of α-L-Iduronidase Deficiency(Hurler Syndrome) in Human Bone Marrow, Proc. Natl. Acad. Sci. U.S.A.93, 2025-2030).

Enzyme Replacement Therapy

Enzyme replacement therapy involves administration, preferablyintravenous, of an exogenously-produced natural or recombinant enzyme.Enzyme replacement therapy proof-of-principle has been established in aHurler animal model (Shull R M et al., 1994, Enzyme Replacement in aCanine Model of Hurler Syndrome, Proc. Natl. Acad. Sci. USA 91,12937-12941). Others have developed effective methods for cell cultureexpression of recombinant enzyme in sufficient quantities to becollected for therapeutic use (Kakkis E D et al., 1994, Overexpressionof the Human Lysosomal Enzyme α-L-Iduronidase in Chinese Hamster OvaryCells, Prot. Express. Purif. 5, 225-232). However, one unsolved problemis the development of antibodies against the replacement enzyme afterlong term therapy (Kakkis E D et al., 1996, Long-Term and High-DoseTrials of Enzyme Replacement Therapy in the Canine Model ofMucopolysaccharidosis I, Biochem. Molec. Med. 58, 156-167).

The use of enzyme replacement therapy has also been investigated forpatients with Pompe disease. However, effective enzyme replacementtherapy requires the use of a precursor α-glucosidase molecule forcorrect targeting to lysosomes (Van Der Ploeg A T et al., 1987,Breakdown of Lysosomal Glycogen in Cultured Fibroblasts fromGlycogenosis Type II Patients After Uptake of Acid α-Glucosidase, J.Neurolog. Sci. 79, 327-336; Van Der Ploeg, A T et al., 1991, IntravenousAdministration of Phosphorylated Acid α-Glucosidase Leads to Uptake ofEnzyme in Heart and Skeletal Muscle of Mice, J. Clin. Invest. 87,513-518; Van Der Ploeg A T et al., 1988, Prospect for Enzyme ReplacementTherapy in Glycogenosis II Variants: A study on Cultured Muscle Cells,J. Neurol. 235, 392-396; Van Der Ploeg A T et al., 1988,Receptor-Mediated Uptake of Acid α-Glucosidase Corrects LysosomalGlycogen Storage in Cultured Skeletal Muscle, Pediatr. Res. 24, 90-94).Despite the requirement for a robust production method for humanrecombinant α-glucosidase, animal and in vitro studies have providedreason for optimism (Van Hove J L K et al., 1996, High-Level Productionof Recombination Human Lysosomal Acid α-Glucosidase in Chinese HamsterOvary Cells Which Targets to Heart Muscle and Corrects GlycogenAccumulation in Fibroblasts from Patients with Pompe Disease, Proc.Natl. Acad. Sci. USA 93, 65-70; Kikuchi T et al., 1998, Clinical andMetabolic Correction of Pompe Disease by Enzyme Therapy in AcidMaltase-Deficient Quail, J. Clin. Invest. 101, 827-833).

Small Molecule Therapy

Recently, a variety of studies have been conducted using several smallmolecules for storage disease therapy. One class of molecules inhibitsupstream generation of lysosomal hydrolase substrate to relieve theinput burden to the defective enzyme. This approach has been dubbed“substrate deprivation” therapy. One example of this class of moleculesis N-butyldeoxynojirimycin (NB-DNJ), an inhibitor of theceramide-specific glucosyltransferase (i.e. glucosylceramide synthase)which catalyzes the first step in the synthesis of glycosphingolipids(GSLs). NB-DNJ has been tested in mouse models of Sandhoff disease(Jeyakumar et al., 1999, Proc. Natl. Acad. Sci. USA 96, 6388-6393),Tay-Sachs disease (Platt et al., 1997, Science 276, 428-431), as well asin humans with Gaucher's disease (Cox et al., 2000, Lancet 355,1481-1485), resulting in an amelioration of symptoms in each of thesediseases. A variety of deoxynojirimycin (DNJ) derivatives have also beensynthesized as research tools intended for the selective inhibition ofthe non-lysosomal glucosylceramidase at concentrations in whichglucosylceramide synthase and other enzymes are not affected (Overkleeftet al., 1998, J. Biol. Chem. 273, 26522-26527). Certain uses ofglucosylceramide synthase inhibitors of the DNJ type either alone (WO00/62780) or in combination with a glycolipid degrading enzyme (WO00/62779) have been described.

Another example of the substrate deprivation class of molecules are theamino ceramide-like small molecules which have been developed forglucosylceramide synthase inhibition. Glucosylceramide synthasecatalyzes the first glycosylation step in the synthesis ofglucosylceramide-based glycosphingolipids. Glucosylceramide itself isthe precursor of hundreds of different glycosphingolipids. Aminoceramide-like compounds have been developed for use in Fabry disease(Abe et al., 2000, J. Clin. Invest. 105, 1563-1571; Abe et al., 2000,Kidney Int'l 57, 446-454) and Gaucher's disease (Shayman et al., 2000,Meth. Enzymol. 31, 373-387; U.S. Pat. Nos. 5,916,911; 5,945,442;5,952,370; 6,030,995; 6,040,332 and 6,051,598). A variety of aminoceramide-like analogues have been synthesized as improved inhibitors ofglucosylceramide synthase (see e.g. Lee et al., 1999, J. Biol. Chem.274, 14662-14669).

Aminoglycosides such as gentamicin and G418 are small molecules whichpromote read-through of premature stop-codon mutations. These so-calledstop-mutation suppressors have been used in Hurler cells to restore alow level of α-L-iduronidase activity (Keeling et al., 2001, Hum. Molec.Genet. 10, 291-299). They have also been developed for use in treatingcystic fibrosis individuals having stop mutations (U.S. Pat. No.5,840,702).

Other Therapies

Various other, disease-specific, treatments have been attempted. Forexample, a high protein diet in adult Pompe has been suggested to combatmuscle wasting, but was effective in improving respiratory or musclefunction in only 25% of individuals (Bodamer O A F et al., 1997, DietaryTreatment in Late-Onset Acid Maltase Deficiency, Eur. J. Pediatr. 156,S39-S42). In Hurler disease, bone marrow transplantation has shownlimited benefits but carries significant risks (Guffon N et al., 1998,Follow-up of Nine Patients with Hurler Syndrome After Bone MarrowTransplantation, J. Pediatr. 133, 119-125; Gullingsrud E O et al., 1998,Ocular Abnormalities in the Mucopolysaccharidoses After Bone MarrowTransplantation, Ophthalmology 105, 1099-1105; Masterson E L et al.,1996, Hip Dysplasia in Hurler's Syndrome: Orthopaedic Management AfterBone Marrow Transplantation, J. Pediatric Orthopaedics 16, 731-733;Peters C et al., 1998, Hurler Syndrome: Past, Present and Future, J.Pediatr. 133, 7-9; Peters C et al., 1998, Hurler Syndrome: II. Outcomeof HLA-Genotypically Identical Sibling and HLA-Haploidentical: RelatedDonor Bone Marrow Transplantation in Fifty-Four Children, Blood 91,2601-2608). Early surgical intervention for nerve compression has beenreported to improve hand function in individuals with Hurler disease(Van Heest A E et al., 1998, Surgical Treatment of Carpal TunnelSyndrome and Trigger Digits in Children with Mucopolysaccharide StorageDisorders, J. Hand Surgery 23A, 236-243).

Kolodny et al. have provided a general overview of several approachesfor treatment of LSDs in current use or development, including bonemarrow transplantation, enzyme replacement therapy, and gene therapy(Kolodny et al., 1998, Id.). However, a need exists for definedcombination therapies that overcome significant limitations associatedwith each of these treatment modalities when used alone. The presentinvention meets this need by providing approaches utilizing combinationsof two or more of enzyme replacement therapy, gene therapy and smallmolecule therapy.

3. SUMMARY OF THE INVENTION

This invention provides various combinations of enzyme replacementtherapy, gene therapy, and small molecule therapy for the treatment oflysosomal storage diseases. According to the invention, several generalapproaches are provided. Each general approach involves combining atleast two of enzyme replacement therapy (ERT), gene therapy (GT), andsmall molecule therapy (SMT) in a manner which optimizes clinicalbenefit while minimizing disadvantages associated with using GT or ERTor SMT alone.

Enzyme replacement therapy may be used as a de-bulking strategy (i.e. toinitiate treatment), followed by or simultaneously supplemented withgene therapy and/or small molecule therapy. An advantage of ERT, whetherused for de-bulking and/or for more long-term care, is the much broaderclinical experience available to inform the practitioner's decisions.Moreover, a subject can be effectively titrated with ERT during thede-bulking phase by, for example, monitoring biochemical metabolites inurine or other body samples, or by measuring affected organ volume. Amajor disadvantage of ERT is the frequency of the administrationrequired, typically involving intravenous injection on a weekly orbi-weekly basis.

Gene therapy may also be administered as an effective method to de-bulka subject, followed by or supplemented with enzyme replacement therapyand/or small molecule therapy as needed (e.g. when a gene therapy vectorimmune response precludes further immediate gene therapy, or when a genetherapy vector is administered in low dose to avoid an immune response,and consequently needs supplementation to provide therapeutic enzymeamounts). The major advantage of gene therapy is the prolonged timecourse of effective treatment which can be achieved. The persistence ofthe transduced gene is such that therapeutically beneficial enzyme isproduced for a duration of from several months to as long as one toseveral years, or even indefinitely, following a single administrationof the gene therapy vector. This low frequency of administration is instark contrast to enzyme replacement therapy, wherein arecombinantly-produced protein is generally required to be administeredon at least a weekly or bi-weekly schedule.

Alternating among GT and ERT and SMT, or supplementing low-dose GT withERT and/or SMT, provides a strategy for simultaneously taking advantageof the strengths and addressing the weaknesses associated with eachtherapy employed alone. On one hand, a vector immune response in asubject undergoing gene therapy can be successfully addressed byswitching the subject to enzyme replacement therapy until the vectorimmune response subsides. On the other hand, a subject currentlyundergoing, for example, a bi-weekly enzyme replacement therapy dosingregimen can be offered an “ERT holiday” (e.g., using a GT administrationwhich is effective for six months or longer, alone or in combinationwith SMT) wherein frequent enzyme injections are not required. therapy.

Accordingly, this invention provides a method of combination therapy fortreatment of a subject diagnosed as having a lysosomal storage diseasecomprising: (a) monitoring the subject for an immune response to a genetherapy; and (b) treating the subject with an enzyme replacement therapyprior to or when the immune response to the gene therapy reaches aparameter determined to be clinically unacceptable.

This invention provides a method of combination therapy for treatment ofa subject diagnosed as having a lysosomal storage disease comprising:(a) monitoring the subject for an immune response to a gene therapy; and(b) treating the subject with a small molecule therapy prior to or whenthe immune response to the gene therapy reaches a parameter determinedto be clinically unacceptable.

This invention provides a method of combination therapy for treatment ofa subject diagnosed as having a lysosomal storage disease comprising:(a) administering a low dose gene therapy to the subject; (b) monitoringthe subject for a disease status indicator in response to the low dosegene therapy; and (c) administering a supplemental enzyme replacementtherapy prior to or when the disease status indicator reaches aparameter determined to be clinically unacceptable.

This invention provides a method of combination therapy for treatment ofa subject diagnosed as having a lysosomal storage disease comprising:(a) administering a low dose gene therapy to the subject; (b) monitoringthe subject for a disease status indicator in response to the low dosegene therapy; and (c) administering a supplemental small moleculetherapy prior to or when the disease status indicator reaches aparameter determined to be clinically unacceptable.

This invention provides a method of combination therapy for treatment ofa subject diagnosed as having a lysosomal storage disease comprising:(a) administering a low dose gene therapy to the subject; (b) monitoringthe subject for a disease status indicator in response to the low dosegene therapy; and (c) simultaneously administering a supplemental enzymereplacement therapy and a small molecule therapy prior to or when thedisease status indicator reaches a parameter determined to be clinicallyunacceptable.

This invention provides a method of combination therapy for treatment ofa subject diagnosed as having a lysosomal storage disease comprising:(a) administering a low dose gene therapy to the subject; (b) monitoringthe subject for a disease status indicator in response to the low dosegene therapy; and (c) alternating between a supplemental enzymereplacement therapy and a small molecule therapy prior to or when thedisease status indicator reaches a parameter determined to be clinicallyunacceptable.

This invention provides a method of combination therapy for treatment ofa subject diagnosed as having a lysosomal storage disease comprisingalternating between administration of an enzyme replacement therapy anda gene therapy.

This invention provides a method of combination therapy for treatment ofa subject diagnosed as having a lysosomal storage disease comprisingalternating between administration of an enzyme replacement therapy anda small molecule therapy.

This invention provides a method of combination therapy for treatment ofa subject diagnosed as having a lysosomal storage disease comprisingalternating between administration of a gene therapy and a smallmolecule therapy.

This invention provides a method of combination therapy for treatment ofa subject diagnosed as having a lysosomal storage disease comprisingalternating between administration of an enzyme replacement therapy, agene therapy, and a small molecule therapy.

This invention provides a method of combination therapy for treatment ofa subject diagnosed as having a lysosomal storage disease comprisingalternating between administration of an enzyme replacement therapy,said enzyme replacement therapy being simultaneously administered with asmall molecule therapy, and a gene therapy.

This invention provides a method of combination therapy for treatment ofa subject diagnosed as having a lysosomal storage disease comprisingalternating between administration of an enzyme replacement therapy anda gene therapy, said gene therapy being simultaneously administered witha small molecule therapy.

This invention provides a method of combination therapy for treatment ofa subject diagnosed as having a lysosomal storage disease comprisingalternating between administration of a small molecule therapy and agene therapy, said gene therapy being simultaneously administered withan enzyme replacement therapy.

This invention provides a method of combination therapy for treatment ofa subject diagnosed as having a lysosomal storage disease comprisingalternating between administration of a gene therapy and an enzymereplacement therapy, wherein each of said gene therapy and said enzymereplacement therapy is simultaneously administered with a small moleculetherapy.

This invention provides a method of combination therapy for treatment ofa subject diagnosed as having a lysosomal storage disease comprisingalternating between administration of a gene therapy and a smallmolecule therapy, wherein each of said gene therapy and said smallmolecule therapy is simultaneously administered with an enzymereplacement therapy.

This invention provides a method of combination therapy for treatment ofa subject diagnosed as having a lysosomal storage disease comprisingalternating between administration of an enzyme replacement therapy anda small molecule therapy, wherein each of said enzyme replacementtherapy and said small molecule therapy is simultaneously administeredwith a gene therapy.

This invention provides a method of combination therapy for treatment ofa subject diagnosed as having a lysosomal storage disease comprisingsimultaneously administering a gene therapy and an enzyme replacementtherapy.

This invention provides a method of combination therapy for treatment ofa subject diagnosed as having a lysosomal storage disease comprisingsimultaneously administering a gene therapy and a small moleculetherapy.

This invention provides a method of combination therapy for treatment ofa subject diagnosed as having a lysosomal storage disease comprisingsimultaneously administering an enzyme replacement therapy and a smallmolecule therapy.

This invention provides a method of combination therapy for treatment ofa subject diagnosed as having a lysosomal storage disease comprisingsimultaneously administering a gene therapy, an enzyme replacementtherapy and a small molecule therapy.

This invention provides a method of combination therapy for treatment ofa subject diagnosed as having a lysosomal storage disease comprising:(a) administering an enzyme replacement therapy for a period of at leastsix months to de-bulk the subject; and (b) administering a gene therapyto the de-bulked subject in order to provide an infusion vacation for aperiod of at least six months.

This invention provides a method for determining when to substituterepeated administration of gene therapy with enzyme replacement therapyin the treatment of Gaucher's disease in a subject comprising: (a)monitoring an immune status indicator in the subject; (b) administeringenzyme replacement therapy in lieu of repeated administration of genetherapy prior to or when the immune status indicator reaches a valuedetermined to be clinically unacceptable. In a preferred embodiment, theenzyme replacement therapy administered in step (b) comprises a dosageregimen of from 2.5 U/kg three times a week to 60 U/kg once every twoweeks.

This invention provides a method for determining when to substituterepeated administration of gene therapy with small molecule therapy inthe treatment of Gaucher's disease in a subject comprising: (a)monitoring an immune status indicator in the subject; (b) administeringsmall molecule therapy in lieu of repeated administration of genetherapy prior to or when the immune status indicator reaches a valuedetermined to be clinically unacceptable.

This invention provides a method for determining when to substituterepeated administration of gene therapy with enzyme replacement therapyin the treatment of Gaucher's disease in a subject comprising: (a)monitoring an immune status indicator in the subject; (b) administeringa combination of enzyme replacement therapy and small molecule therapyin lieu of repeated administration of gene therapy prior to or when theimmune status indicator reaches a value determined to be clinicallyunacceptable. In a preferred embodiment, the enzyme replacement therapyadministered in step (b) comprises a dosage regimen of from 2.5 U/kgthree times a week to 60 U/kg once every two weeks.

This invention provides a method for determining when to substituterepeated administration of gene therapy with enzyme replacement therapyin the treatment of Fabry's disease in a subject comprising: (a)monitoring globotriaosylceramide and pain in the subject; (b)administering enzyme replacement therapy instead of repeatedadministration of gene therapy prior to or when globotriaosylceramide orpain reaches a value determined to be clinically unacceptable.

This invention provides a method for determining when to substituterepeated administration of gene therapy with small molecule therapy inthe treatment of Fabry's disease in a subject comprising: (a) monitoringglobotriaosylceramide and pain in the subject; (b) administering smallmolecule therapy instead of repeated administration of gene therapyprior to or when globotriaosylceramide or pain reaches a valuedetermined to be clinically unacceptable.

This invention provides a method for determining when to substituterepeated administration of gene therapy with small molecule therapy inthe treatment of Fabry's disease in a subject comprising: (a) monitoringglobotriaosylceramide and pain in the subject; (b) administering acombination of small molecule therapy and enzyme replacement therapyinstead of repeated administration of gene therapy prior to or whenglobotriaosylceramide or pain reaches a value determined to beclinically unacceptable.

This invention provides a method for determining when to substituterepeated administration of gene therapy with enzyme replacement therapyin the treatment of Fabry's disease in a subject comprising: (a)monitoring globotriaosylceramide and pain in the subject; (b)administering enzyme replacement therapy instead of repeatedadministration of gene therapy prior to or when globotriaosylceramideand pain reach values determined to be clinically unacceptable.

This invention provides a method for determining when to substituterepeated administration of gene therapy with small molecule therapy inthe treatment of Fabry's disease in a subject comprising: (a) monitoringglobotriaosylceramide and pain in the subject; (b) administering smallmolecule therapy instead of repeated administration of gene therapyprior to or when globotriaosylceramide and pain reach values determinedto be clinically unacceptable.

This invention provides a method for determining when to substituterepeated administration of gene therapy with small molecule therapy inthe treatment of Fabry's disease in a subject comprising: (a) monitoringglobotriaosylceramide and pain in the subject; (b) administering acombination of small molecule therapy and enzyme replacement therapyinstead of repeated administration of gene therapy prior to or whenglobotriaosylceramide and pain reach values determined to be clinicallyunacceptable.

In the various combination therapies of the invention, it will beunderstood that administering small molecule therapy may occur prior to,concurrently with, or after, administration of one or more of the othertherapies. Similarly, administering enzyme replacement therapy may occurprior to, concurrently with, or after, administration of one or more ofthe other therapies. Finally, administering gene therapy may occur priorto, concurrently with, or after, administration of one or more of theother therapies.

In any of the foregoing embodiments of the invention, the lysosomalstorage disease is selected from the group consisting of Gaucher,Niemann-Pick, Farber, G_(M1)-gangliosidosis, G_(M2)-gangliosidosis(Sandhoff), Tay-Sachs, Krabbe, Hurler-Scheie (MPS I), Hunter (MPS II),Sanfilippo (MPS III) Type A, Sanfilippo (MPS III) Type B, Sanfilippo(MPS III) Type C, Sanfilippo (MPS III) Type D, Marquio (MPS IV) Type A,Marquio (MPS IV) Type B, Maroteaux-Lamy (MPS VI), Sly (MPS VII),mucosulfatidosis, sialidoses, mucolipidosis II, mucolipidosis III,mucolipidosis IV, Fabry, Schindler, Pompe, sialic acid storage disease,fucosidosis, mannosidosis, aspartylglucosaminuria, Wolman, and neuronalceroid lipofucsinoses.

Further, the foregoing combination therapies provide an effective amountof at least one enzyme selected from the group consisting ofglucocerebrosidase, sphingomyelinase, ceramidase,G_(M1)-ganglioside-β-galactosidase, hexosaminidase A, hexosaminidase B,β-galactocerebrosidase, α-L-iduronidase, iduronate sulfatase,heparan-N-sulfatase, N-acetyl-α-glucosaminidase, acetylCoA:α-glucosaminide acetyl-transferase,N-acetyl-α-glucosamine-6-sulfatase, galactosamine-6-sulfatase,β-galactosidase, galactosamine-4-sulfatase (arylsulfatase B),β-glucuronidase, arylsulfatase A, arylsulfatase C, α-neuraminidase,N-acetyl-glucosamine-1-phosphate transferase, α-galactosidase A,α-N-acetylgalactosaminidase, α-glucosidase, α-fucosidase, α-mannosidase,aspartylglucosamine amidase, acid lipase, and palmitoyl-proteinthioesterase (CLN-1).

Still further, the foregoing combination therapy produces a diminutionin at least one stored material selected from the group consisting ofglucocerebroside, sphingomyelin, ceramide, G_(M1)-ganglioside,G_(M2)-ganglioside, globoside, galactosylceramide, dermatan sulfate,heparan sulfate, keratan sulfate, sulfatides, mucopolysaccharides,sialyloligosaccharides, glycoproteins, sialyloligosaccharides,glycolipids, globotriaosylceramide, O-linked glycopeptides, glycogen,free sialic acid, fucoglycolipids, fucosyloligosaccharides,mannosyloligosaccharides, aspartylglucosamine, cholesteryl esters,triglycerides, and ceroid lipofuscin pigments.

In one embodiment of the invention, the small molecule therapy comprisesadministering to the subject an effective amount of deoxynojirimycin ora deoxynojirimycin derivative. In another embodiment, thedeoxynojirimycin derivative is N-propyldeoxynojirimycin,N-butyldeoxynojirimycin, N-butyldeoxygalactonojirimycin,N-pentlydeoxynojirimycin, N-heptyldeoxynojirimycin,N-pentanoyldeoxynojirimycin,N-(5-adamantane-1-ylmethoxy)pentyl)-deoxynojirimycin,N-(5-cholesteroxypentyl)-deoxynojirimycin,N-(4-adamantanemethanylcarboxy-1-oxo)-deoxynojirimycin,N-(4-adamantanylcarboxy-1-oxo)-deoxynojirimycin,N-(4-phenantrylcarboxy-1-oxo)-deoxynojirimycin,N-(4-cholesterylcarboxy-1-oxo)-deoxynojirimycin, orN-(4-β-cholestanylcarboxy-1-oxo)-deoxynojirimycin.

In another embodiment, the small molecule therapy comprisesadministering to the subject an effective amount ofD-threo-1-phenyl-2-palmitoylamino-3-pyrrolidino-1-propanol (P4) or a P4derivative. In another embodiment, the P4 derivative is selected fromthe group consisting ofD-threo-4′-hydroxy-1-phenyl-2-palmitoylamino-3-pyrrolidino-1-propanol(4′-hydroxy-P4),D-threo-1-(3′,4′-trimethylenedioxy)phenyl-2-palmitoylamino-3-pyrrolidino-1-propanol(trimethylenedioxy-P4),D-threo-1-(3′,4′-methylenedioxy)phenyl-2-palmitoylamino-3-pyrrolidino-1-propanol(methylenedioxy-P4) andD-threo-1-(3′,4′-ethylenedioxy)phenyl-2-palmitoylamino-3-pyrrolidino-1-propanol(ethylenedioxy-P4 or D-t-et-P4).

In one embodiment of the invention, the lysosomal storage disease isattributable at least in part to a stop codon mutation in a geneencoding a lysosomal storage enzyme, and wherein the small moleculetherapy comprises administering to the subject an effective amount of anaminoglycoside. In another embodiment, the aminoglycoside is gentamicin,G418, hygromycin B, paromomycin, tobramycin or Lividomycin A.

In another embodiment, the immune response to gene therapy is monitoredby assay of an immune status indicator selected from the groupconsisting an antibody and a cytokine. In another embodiment, thecytokine is selected from the group consisting of IL-1α, IL-2, IL-4,IL-8, IL-10, G-CSF, GM-CSF, M-CSF, α-interferon, β-interferon andγ-interferon. In another embodiment, the antibody is specificallyreactive with an antigen selected from the group consisting of a viralantigen, a lipid antigen and a DNA antigen.

In one preferred embodiment, the lysosomal storage disease has at leastone central nervous system manifestation and the small molecule therapycomprises AMP-DNJ.

In the various embodiments of the invention, the subject may be a humanor a non-human animal.

4. BRIEF DESCRIPTION OF THE DRAWINGS

FIG. 1 In vivo efficacy of combination enzyme replacement therapy plussmall molecule therapy in Fabry disease. FIG. 1A. Study protocol forsequential combination of enzyme (α-galactosidase A) replacementfollowed by small molecule administration (NB-DNJ, AMP-DNJ or D-t-et-P4)on globotriaosylceramide (GB3) re-accumulation in Fabry mice. FIG. 1B.Results of study protocol for Fabry mouse liver tissue. GB3re-accumulation at four weeks (μg GB3 per gm liver tissue) is plotted onthe ordinate versus absence of small molecule treatment (Vehicle) ordaily intra-peritoneal small molecule therapy with D-t-et-P4 (at either5 mg/kg or 0.5 mg/kg), NB-DNJ (at 500 mg/kg), or AMP-DNJ (at 100 mg/kg).Baseline GB3 level in Fabry mouse liver (about 0.1 μg/gm liver tissue)shows the GB3 level achieved at two weeks following a singleα-galactosidase A intravenous infusion. In control animals receivingdaily Vehicle administration, GB3 re-accumulated to about 0.8 μg/gmliver tissue at the four week time point. In marked contrast, D-t-et-P4(5 mg/kg) and AMP-DNJ (100 mg/kg) reduced GB3 re-accumulation in Fabrymouse liver tissue to less than about 0.4 μg/gm or 0.3 μg/gm,respectively, at the four week time point.

5. DETAILED DESCRIPTION OF THE INVENTION

The therapeutic methods of the invention described herein providetreatment options for the practitioner faced with management of variouslysosomal storage diseases, as described in detail below. Morespecifically, the invention relates to various combinations of enzymereplacement therapy and gene therapy for the treatment of lysosomalstorage diseases.

A partial list of known lysosomal storage diseases that can be treatedin accordance with the invention is set forth in Table 1, includingcommon disease name, material stored, and corresponding enzymedeficiency (adapted from Table 38-4 of Kolodny et al., 1998, Id.).

TABLE 1 Lysosomal Storage Diseases Disease Material Stored EnzymeDeficiency Sphingolipidoses Gaucher Glucocerebroside GlucocerebrosidaseNiemann-Pick Sphingomyelin Sphingomyelinase Farber Ceramide CeramidaseG_(M1)-gangliosidosis G_(M1)-ganglioside, G_(M1)-ganglioside-β-glycoprotein galactosidase G_(M2)-gangliosidosis G_(M2)-ganglioside,Hexosaminidase A and B (Sandhoff) globoside Tay-Sachs G_(M2)-gangliosideHexosaminidase A Krabbe Galactosylceramide β-GalactocerebrosidaseMucopolysaccharidoses Hurler-Scheie (MPS I) Dermatan sulfate, heparanα-L-iduronidase sulfate Hunter (MPS II) Dermatan sulfate, heparanIduronate sulfatase sulfate Sanfilippo (MPS III) Type A Heparan sulfateHeparan-N-sulfatase Type B Heparan sulfate N-acetyl-α- glucosaminidaseType C Heparan sulfate Acetyl CoA: α-glucosaminide acetyl-transferaseType D Heparan sulfate N-acetyl-α-glucosamine-6- sulfatase Marquio (MPSIV) Type A Keratan sulfate Galactosamine-6-sulfatase Type B Keratansulfate β-galactosidase Maroteaux-Lamy (MPS VI) Dermatan sulfateGalactosamine-4-sulfatase (arylsulfatase B) Sly (MPS VII) Dermatansulfate, heparan β-glucuronidase sulfate Mucosulfatidosis Sulfatides,Arylsulfatase A, B and C, mucopolysaccharides other sulfatasesMucolipidoses Sialidoses Sialyloligosaccharides, α-neuraminidaseglycoproteins Mucolipidosis II Sialyloligosaccharides, High serum, lowfibroblast glycoproteins, enzymes; N-acetyl- glycolipidsglucosamine-1-phosphate transferase Mucolipidosis III Glycoproteins,glycolipids Same as above Mucolipidosis IV Glycolipids, glycoproteinsUnknown Other Diseases of Complex Carbohydrate Metabolism FabryGlobotriaosylceramide α-galactosidase A Schindler O-linked glycopeptidesα-N-acetylgalactosaminidase Pompe Glycogen α-glucosidase Sialic acidstorage disease Free sialic acid Unknown Fucosidosis Fucoglycolipids,α-fucosidase fucosyloligosaccharides MannosidosisMannosyloligosaccharides α-mannosidase AspartylglucosaminuriaAspartylglucosamine Aspartylglucosamine amidase Wolman Cholesterylesters, Acid lipase triglycerides Neuronal ceroid Ceroid lipofuscinPalmitoyl-protein lipofucsinoses pigments thioesterase (CLN-1)

An “effective amount” of an enzyme, small molecule, or gene therapy,when delivered to a subject in a combination therapy of the invention,is an amount sufficient to improve the clinical course of a lysosomalstorage disease, where clinical improvement is measured by any of thevariety of defined parameters well known to the skilled artisan.

Any method known to the skilled artisan may be used to monitor diseasestatus and the effectiveness of a combination therapy of the invention.Clinical monitors of disease status may include but are not limited toorgan volume (e.g. liver, spleen), hemoglobin, erythrocyte count,hematocrit, thrombocytopenia, cachexia (wasting), and plasma chitinaselevels (e.g. chitotriosidase). Chitotriosidase, an enzyme of thechitinase family, is known to be produced by macrophages in high levelsin subjects with lysosomal storage diseases (see Guo et al., 1995, J.Inherit. Metab. Dis. 18, 717-722; den Tandt et al., 1996, J. Inherit.Metab. Dis. 19, 344-350; Dodelson de Kremer et al., 1997, Medicina(Buenos Aires) 57, 677-684; Czartoryska et al., 2000, Clin. Biochem. 33,147-149; Czartoryska et al., 1998, Clin. Biochem. 31, 417-420; Mistry etal., 1997, Baillieres Clin. Haematol. 10, 817-838; Young et al., 1997,J. Inherit. Metab. Dis. 20, 595-602; Hollak et al., 1994, J. Clin.Invest. 93, 1288-1292).

Methods and formulations for administering the combination therapies ofthe invention include all methods and formulations well known in the art(see, e.g., Remington r Pharmaceutical Sciences, 1980 and subsequentyears, 16th ed. and subsequent editions, A. Oslo editor, Easton Pa.;Controlled Drug Delivery, 1987, 2nd rev., Joseph R. Robinson & VincentH. L. Lee, eds., Marcel Dekker, ISBN: 0824775880; Encyclopedia ofControlled Drug Delivery, 1999, Edith Mathiowitz, John Wiley & Sons,ISBN: 0471148288; U.S. Pat. No. 6,066,626 and references cited therein;see also, references cited in sections below).

According to the invention, the following general approaches areprovided for combination therapy in the treatment of lysosomal storagediseases. Each general approach involves combining enzyme replacementtherapy with gene therapy and/or with small molecule therapy in a mannerconsistent with optimizing clinical benefit while minimizingdisadvantages associated with using each therapy alone.

In a first general approach to a combination therapy of the invention,enzyme replacement therapy (alone or in combination with small moleculetherapy) is administered to initiate treatment (i.e. to de-bulk thesubject), and gene therapy (alone or in combination with small moleculetherapy) is administered after the de-bulking phase to achieve andmaintain a stable, long-term therapeutic effect without the need forfrequent intravenous ERT injections. For example, enzyme replacementtherapy may be administered intravenously (e.g. over a one to two hourperiod) on a weekly or bi-weekly basis for one to several weeks ormonths, or longer (e.g. until an involved indicator organ such as spleenor liver shows a decrease in size). Moreover, the ERT phase of initialde-bulking treatment can be performed alone or in combination with asmall molecule therapy. After this initial phase, gene therapy may beadministered to achieve a prolonged clinical benefit that does notrequire frequent intravenous intervention. Depending on the nature ofthe gene therapy vector introduced, the gene therapy component of acombination therapy of the invention optimally will not need supplementfor a period of six months, one year, or even indefinitely. An SMTcomponent of a combination therapy can be adjusted as needed throughoutthe course of the storage disease by the skilled practitioner bymonitoring well known clinical signs of disease progression orremission. A small molecule therapeutic component is particularlypreferred where the small molecule is compatible with oraladministration, thus providing further relief from frequent intravenousintervention.

In a second general approach to a combination therapy of the invention,gene therapy can be administered to de-bulk the subject, followed by orsimultaneously supplemented with enzyme replacement therapy and/or smallmolecule therapy. Such an approach is particularly indicated where alysosomal storage disease exhibits clinical pathology in an organ havinga relatively low circulation (e.g. lymph nodes). In this scenario,deposition and long-term residence of the therapeutic gene by GT at alow-circulation site reduces the dependence of clinical success onrepeated IV injections that may have trouble reaching the site. Enzymereplacement therapy and/or small molecule therapy is then used as neededto supplement or maintain the clinical benefit from gene therapy.Moreover, a relatively low dose of gene therapy may be initiallyemployed, e.g. to minimize a vector immune response, supplemented withsimultaneous enzyme replacement and/or small molecule therapy as neededto achieve the desired clinical result.

A third general approach to a combination therapy of the inventioninvolves alternative dosing. In one embodiment of alternative dosing,enzyme replacement therapy and/or small molecule therapy may beadministered during a period of time required for immune system recoveryfrom an immune response raised against a gene therapy vector. In anotherembodiment of alternative dosing, gene therapy is administered toprovide a prolonged period of time (e.g. six months to one year orlonger) wherein weekly or bi-weekly intravenous enzyme infusions are notrequired (i.e. an “infusion vacation”). Of course, the GT component andthe ERT component can each be supplemented with small molecule therapyas needed.

A variety of gene therapy vectors are available for the treatment of thevarious LSDs (described in detail below). For example, in vivo and exvivo approaches to gene therapy may be implemented using viral ornon-viral vectors. The central nervous system (CNS) is generally muchharder to target than the reticuloendothelial system (RES) because ofthe blood-brain barrier (BBB). However, bone marrow cells transduced toexpress a therapeutic gene may provide some CNS benefit. Finally,cationic-lipid-plus-plasmid combinations are especially indicated fordiseases that have lung involvement since they can, for example, beadministered by aerosol at the disease locus.

Gene therapy and enzyme replacement therapy can provoke unwanted immuneresponses. Accordingly, immunosuppressant agents may be used togetherwith a gene therapy component or an enzyme replacement therapy componentof a combination therapy of the invention. Such agents may also be usedwith a small molecule therapy component, but the need for interventionhere is generally less likely. Any immunosuppressant agent known to theskilled artisan may be employed together with a combination therapy ofthe invention. Such immunosuppressant agents include but are not limitedto cyclosporine, FK506, rapamycin, CTLA4-Ig, and anti-TNF agents such asetanercept (see e.g. Moder, 2000, Ann. Allergy Asthma Immunol. 84,280-284; Nevins, 2000, Curr. Opin. Pediatr. 12, 146-150; Kurlberg etal., 2000, Scand. J. Immunol. 51, 224-230; Ideguchi et al., 2000,Neuroscience 95, 217-226; Potter et al., 1999, Ann. N.Y. Acad. Sci. 875,159-174; Slavik et al., 1999, Immunol. Res. 19, 1-24; Gaziev et al.,1999, Bone Marrow Transplant. 25, 689-696; Henry, 1999, Clin.Transplant. 13, 209-220; Gummert et al., 1999, J. Am. Soc. Nephrol. 10,1366-1380; Qi et al., 2000, Transplantation 69, 1275-1283). The anti-IL2receptor (α-subunit) antibody daclizumab (e.g. Zenapax™), which has beendemonstrated effective in transplant patients, can also be used as animmunosuppressant agent (see e.g. Wiseman et al., 1999, Drugs 58,1029-1042; Beniaminovitz et al., 2000, N. Engl J. Med. 342, 613-619;Ponticelli et al., 1999, Drugs R. D. 1, 55-60; Berard et al., 1999,Pharmacotherapy 19, 1127-1137; Eckhoff et al., 2000, Transplantation 69,1867-1872; Ekberg et al., 2000, Transpl. Int. 13, 151-159). Additionalimmunosuppressant agents include but are not limited to anti-CD2 (Brancoet al., 1999, Transplantation 68, 1588-1596; Przepiorka et al., 1998,Blood 92, 4066-4071), anti-CD4 (Marinova-Mutafchieva et al., 2000,Arthritis Rheum. 43, 638-644; Fishwild et al., 1999, Clin. Immunol. 92,138-152), and anti-CD40 ligand (Hong et al., 2000, Semin. Nephrol. 20,108-125; Chirmule et al., 2000, J. Virol. 74, 3345-3352; Ito et al.,2000, J. Immunol. 164, 1230-1235).

Any combination of immunosuppressant agents known to the skilled artisancan be used together with a combination therapy of the invention. Oneimmunosuppressant agent combination of particular utility is tacrolimus(FK506) plus sirolimus (rapamycin) plus daclizumab (anti-IL2 receptorα-subunit antibody). This combination is proven effective as analternative to steroids and cyclosporine, and when specificallytargeting the liver. Moreover, this combination has recently been shownto permit successful pancreatic islet cell transplants. See DeniseGrady, The New York Times, Saturday, May 27, 2000, pages A1 and A11. Seealso A. M. Shapiro et al., Jul. 27, 2000, “Islet Transplantation InSeven Patients With Type 1 Diabetes Mellitus Using A Glucocorticoid-FreeImmunosuppressive Regimen”, N. Engl. J. Med. 343, 230-238; Ryan et al.,2001, Diabetes 50, 710-719. Plasmaphoresis by any method known in theart may also be used to remove or deplete antibodies that may developagainst various components of a combination therapy.

Immune status indicators of use with the invention include but are notlimited to antibodies and any of the cytokines known to the skilledartisan, e.g., the interleukins, CSFs and interferons (see generally,Leonard et al., 2000, J. Allergy Clin. Immunol. 105, 877-888; Oberholzeret al., 2000, Crit. Care Med. 28 (4 Suppl.), N3-N12; Rubinstein et al.,1998, Cytokine Growth Factor Rev. 9, 175-181). For example, antibodiesspecifically immunoreactive with the replacement enzyme or vectorcomponents can be monitored to determine immune status of the subject.Among the two dozen or so interleukins known, particularly preferredimmune status indicators are IL-1α, IL-2, IL-4, IL-8 and IL-10. Amongthe colony stimulating factors (CSFs), particularly preferred immunestatus indicators are G-CSF, GM-CSF and M-CSF. Among the interferons,one or more alpha, beta or gamma interferons are preferred as immunestatus indicators.

In Sections 5.1 through 5.8 which follow, various components which maybe used for eight specific lysosomal storage diseases are provided (i.e.Gaucher, Fabry, Niemann-Pick B, Hunter, Morquio, Maroteaux-Lamy, Pompe,and Hurler-Scheie). In Section 5.9 and subsequent sections, furtherenabling disclosure for gene therapy, enzyme replacement therapy, andsmall molecule therapy components of a combination therapy of theinvention are provided.

5.1 Gaucher

As noted above, Gaucher's disease is caused by inactivation of theenzyme glucocerebrosidase (β-D-glucosyl-N-acylsphingosineglucohydrolase, EC 3.2.1.45) and accumulation of glucocerebroside(glucosylceramide). For an enzyme replacement therapy component of acombination therapy of the invention for the treatment of Gaucher'sdisease, a number of references are available which set forthsatisfactory dosage regimens and other useful information relating totreatment (see Morales, 1996, Gaucher's Disease: A Review, The Annals ofPharmacotherapy 30, 381-388; Rosenthal et al., 1995, Enzyme ReplacementTherapy for Gaucher Disease: Skeletal Responses to Macrophage-targetedGlucocerebrosidase, Pediatrics 96, 629-637; Barton et al., 1991,Replacement Therapy for Inherited Enzyme Deficiency—Macrophage-targetedGlucocerebrosidase for Gaucher's Disease, New England Journal ofMedicine 324, 1464-1470; Grabowski et al., 1995, Enzyme Therapy in Type1 Gaucher Disease: Comparative Efficacy of Mannose-terminatedGlucocerebrosidase from Natural and Recombinant Sources, Annals ofInternal Medicine 122, 33-39; Pastores et al., 1993, Enzyme Therapy inGaucher Disease Type 1: Dosage Efficacy and Adverse Effects in 33Patients treated for 6 to 24 Months, Blood 82, 408-416).

In one embodiment, an ERT dosage regimen of from 2.5 units per kilogram(U/kg) three times a week to 60 U/kg once every two weeks is provided,where the enzyme is administered by intravenous infusion over 1-2 hours.A unit of glucocerebrosidase is defined as the amount of enzyme thatcatalyzes the hydrolysis of one micromole of the synthetic substratepara-nitrophenyl-β-D-glucopyranoside per minute at 37° C. In anotherembodiment, a dosage regimen of from 1 U/kg three times a week to 120U/kg once every two weeks is provided. In yet another embodiment, adosage regimen of from 0.25 U/kg daily or three times a week to 600 U/kgonce every two to six weeks is provided.

Since 1991, aglucerase (Ceredase™) has been available from GenzymeCorporation. Aglucerase is a placentally-derived modified form ofglucocerebrosidase. In 1994, imiglucerase (Cerezyme™) also becameavailable from Genzyme Corporation. Imiglucerase is a modified form ofglucocerebrosidase derived from expression of recombinant DNA in amammalian cell culture system (Chinese hamster ovary cells).Imiglucerase is a monomeric glycoprotein of 497 amino acids containingfour N-linked glycosylation sites. Imiglucerase has the advantages of atheoretically unlimited supply and a reduced chance of biologicalcontaminants relative to placentally-derived aglucerase. Both enzymesare modified at their glycosylation sites to expose mannose residues, amaneuver which improves lysosomal targeting via the mannose-6-phosphatereceptor. Imiglucerase differs from placental glucocerebrosidase by oneamino acid at position 495 where histidine is substituted for arginine.Several dosage regimens of these products are known to be effective (seeMorales, 1996, Id.; Rosenthal et al., 1995, Id.; Barton et al., 1991,Id.; Grabowski et al., 1995, Id.; Pastores et al., 1993, Id.). Forexample, a dosage regimen of 60 U/kg once every two weeks is of clinicalbenefit in subjects with moderate to severe disease. The referencescited above and the package inserts for these products should beconsulted by the skilled practitioner for additional dosage regimen andadministration information. See also U.S. Pat. Nos. 5,236,838 and5,549,892 assigned to Genzyme Corporation.

For a small molecule therapy component of a combination therapy of theinvention for the treatment of Gaucher's disease, Cox and colleaguesprovide specific guidance regarding satisfactory dosage regimens andother useful information relating to oral treatment withN-butyldeoxynojirimycin (NB-DNJ) in Gaucher's disease (Cox et al., 2000,Lancet 355, 1481-1485). Additional guidance is provided by the followingreferences relating to various deoxynojirimycin (DNJ)-like compounds:Jeyakumar et al., 2001, Blood 97, 327-329 (NB-DNJ therapy plus bonemarrow transplantation); Andersson et al., 2000, Biochem. Pharmacol. 59,821-829 (N-butyldeoxygalactonojirimycin as a more selective inhibitorthan NB-DNJ); Jeyakumar et al., 1999, Proc. Natl. Acad. Sci. USA 96,6388-6393 (NB-DNJ for treatment of glycosphingolipid storage diseaseshaving a CNS component); and Platt et al., 1997, Science 276, 428-431(CNS benefit using NB-DNJ to achieve substrate deprivation).

5.2 Fabry

As noted previously, Fabry's disease is caused by inactivation of thelysosomal enzyme alpha-galactosidase A. The enzymatic defect leads tosystemic deposition of glycosphingolipids having terminalalpha-galactosyl moieties, predominantly globotriaosylceramide (GL-3 orGL3, see FIG. 1) and, to a lesser extent, galabiosylceramide and bloodgroup B glycosphingolipids.

Several assays are available to monitor disease progression and todetermine when to switch from one treatment modality to another. In oneembodiment, an assay to determine the specific activity ofalpha-galactosidase A in a tissue sample may be used. In anotherembodiment, an assay to determine the accumulation of GL-3 may be used.In another embodiment, the practitioner may assay for deposition ofglycosphingolipid substrates in body fluids and in lysosomes of vascularendothelial, perithelial and smooth muscle cells of blood vessels. Otherclinical manifestations which may be useful indicators of diseasemanagement include proteinuria, or other signs of renal impairment suchas red cells or lipid globules in the urine, and elevated erythrocytesedimentation rate. One can also monitor anemia, decreased serum ironconcentration, high concentration of beta-thromboglobulin, and elevatedreticulocyte counts or platelet aggregation. Indeed, any approach formonitoring disease progression which is known to the skilled artisan maybe used (See generally Desnick R J et al., 1995, α-Galactosidase ADeficiency: Fabry Disease, In: The Metabolic and Molecular Bases ofInherited Disease, Scriver et al., eds., McGraw-Hill, New York, 7^(th)ed., pages 2741-2784).

A preferred surrogate marker is pain for monitoring Fabry diseasemanagement. Other preferred methods include the measurement of totalclearance of the enzyme and/or substrate from a bodily fluid or biopsyspecimen.

A preferred dosage regimen for enzyme replacement therapy in Fabrydisease is 1-10 mg/kg i.v. every other day. A dosage regimen from 0.1 to100 mg/kg i.v. at a frequency of from every other day to once weekly orevery two weeks can be used.

In a preferred embodiment, alpha-galactosidase A is provided in Fabrydisease using the recombinant viral and/or non viral vectors describedin U.S. Pat. No. 6,066,626.

5.3 Niemann-Pick B

As previously noted, Niemann-Pick B disease is caused by reducedactivity of the lysosomal enzyme sphingomyelinase and accumulation ofmembrane lipid, primarily sphingomyelin. An effective dosage ofreplacement sphingomyelinase to be delivered may range from about 1 toabout 10 mg/kg body weight at a frequency of from every other day toweekly or bi-weekly.

5.4 Hunter

Hunter's disease (a.k.a. MPS II) is caused by inactivation of iduronatesulfatase and accumulation of dermatan sulfate and heparan sulfate.Hunter's disease presents clinically in severe and mild forms.

A dosage regimen of therapeutic enzyme from 1.5 mg/kg every two weeks to50 mg/kg every week is preferred.

5.5 Morquio

Morquio's syndrome (a.k.a. MPS IV) results from accumulation of keratansulfate due to inactivation of either of two enzymes. In MPS IVA theinactivated enzyme is galactosamine-6-sulfatase and in MPS IVB theinactivated enzyme is beta-galactosidase.

A dosage regimen of therapeutic enzyme from 1.5 mg/kg every two weeks to50 mg/kg every week is preferred.

5.6 Maroteaux-Lamy

Maroteaux-Lamy syndrome (a.k.a. MPS VI) is caused by inactivation ofgalactosamine-4-sulfatase (arylsulfatase B) and accumulation of dermatansulfate.

A dosage regimen of from 1.5 mg/kg every two weeks to 50 mg/kg everyweek is a preferred range of effective therapeutic enzyme provided byERT. Optimally, the dosage employed is less than or equal to 10 mg/kgper week.

A preferred surrogate marker for MPS VI disease progression isproteoglycan levels.

5.7 Pompe

Pompe's disease is caused by inactivation of the acid alpha-glucosidaseenzyme and accumulation of glycogen. The acid alpha-glucosidase generesides on human chromosome 17 and is designated GAA. H. G. Hers firstproposed the concept of inborn lysosomal disease based on his studies ofthis disease, which he referred to as type II glycogen storage disease(GSD II) and which is now also termed acid maltase deficiency (AMD) (seeHers, 1965, Gastroenterology 48, 625).

Several assays are available to monitor Pompe disease progression. Anyassay known to the skilled artisan may be used. For example, one canassay for intra-lysosomal accumulation of glycogen granules,particularly in myocardium, liver and skeletal muscle fibers obtainedfrom biopsy. Alpha-glucosidase enzyme activity can also be monitored inbiopsy specimens or cultured cells obtained from peripheral blood. Serumelevation of creatine kinase (CK) can be monitored as an indication ofdisease progression. Serum CK can be elevated up to ten-fold ininfantile-onset patients and is usually elevated to a lesser degree inadult-onset patients. See Hirschhorn R, 1995, Glycogen Storage DiseaseType II: Acid α-Glucosidase (Acid Maltase) Deficiency, In: The Metabolicand Molecular Bases of Inherited Disease, Scriver et al., eds.,McGraw-Hill, New York, 7^(th) ed., pages 2443-2464.

5.8 Hurler-Scheie

Hurler, Scheie, and Hurler-Scheie disease, also known as MPS I, arecaused by inactivation of alpha-iduronidase and accumulation of dermatansulfate and heparan sulfate.

Several assays are available to monitor MPS I disease progression. Forexample, alpha-iduronidase enzyme activity can be monitored in tissuebiopsy specimens or cultured cells obtained from peripheral blood. Inaddition, a convenient measure of disease progression in MPS I and othermucopolysaccharidoses is the urinary excretion of the glycosaminoglycansdermatan sulfate and heparan sulfate (see Neufeld et al., 1995, Id.).

5.9 Gene Therapy

One of the most frequently used methods for administration of genetherapy, both in vivo and ex vivo, is the use of viral vectors fordelivery of the gene. Many species of virus are known, and many havebeen extensively studied for gene therapy purposes. The most commonlyused viral vectors include those derived from adenovirus,adeno-associated virus (AAV) and retrovirus, including lentivirus suchas human immunodeficiency virus (HIV). See also WO 99/57296 and WO99/41399.

Among adenovirus, pseudoadenovirus (PAV or gutless adenovirus) is aparticularly preferred vector (see below). In this group of vectors, atitre range of from 10⁹ to 10¹³ particles per kg body weight ispreferred for administration to a subject. For AAV, a titre range offrom 10⁹ to 10¹⁴ particles per kg body weight is preferred foradministration to a subject. For lentivirus, a titre range of from 10⁶to 10¹⁰ particles per kg body weight is preferred for administration toa subject. In each instance, the exact titre is determined by adjustingthe titre to the amount necessary to deliver an effective amount ofenzyme.

5.9.1 Adenovirus

Adenoviral vectors for use to deliver transgenes to cells for variousapplications, such as in vivo gene therapy and in vitro study and/orproduction of the products of transgenes, are commonly derived fromadenoviruses by deletion of the early region 1 (E1) genes (Berkner, K.L., 1992, Curr. Top. Micro. Immunol. 158, 39-66). Deletion of E1 genesrenders such adenoviral vectors replication defective and significantlyreduces expression of the remaining viral genes present within thevector. However, it is believed that the presence of the remaining viralgenes in adenoviral vectors can be deleterious to the transfected cellfor one or more of the following reasons: (1) stimulation of a cellularimmune response directed against expressed viral proteins; (2)cytotoxicity of expressed viral proteins; and (3) replication of thevector genome leading to cell death.

One solution to this problem has been the creation of adenoviral vectorswith deletions of various adenoviral gene sequences. In particular,pseudoadenoviral vectors (PAVs), also known as ‘gutless adenovirus’ ormini-adenoviral vectors, are adenoviral vectors derived from the genomeof an adenovirus that contain minimal cis-acting nucleotide sequencesrequired for the replication and packaging of the vector genome andwhich can contain one or more transgenes (see, U.S. Pat. No. 5,882,877by Gregory et al. which covers pseudoadenoviral vectors (PAV) andmethods for producing PAV). Such PAVs, which can accommodate up to about36 kb of foreign nucleic acid, are advantageous because the carryingcapacity of the vector is optimized while the potential for host immuneresponses to the vector or the generation of replication-competentviruses is reduced. PAV vectors contain the 5′ inverted terminal repeat(ITR) and the 3′ ITR nucleotide sequences that contain the origin ofreplication, and the cis-acting nucleotide sequence required forpackaging of the PAV genome, and can accommodate one or more transgeneswith appropriate regulatory elements, e.g. promoters, enhancers, etc.

Adenoviral vectors, such as PAVs, have been designed to take advantageof the desirable features of adenovirus which render it a suitablevehicle for delivery of nucleic acids to recipient cells. Adenovirus isa non-enveloped, nuclear DNA virus with a genome of about 36 kb, whichhas been well-characterized through studies in classical genetics andmolecular biology (Hurwitz, M. S., Adenoviruses, Virology, 3rd edition,Fields et al., eds., Raven Press, New York, 1996; Hitt, M. M. et al.,Adenovirus Vectors, The Development of Human Gene Therapy, Friedman, T.ed., Cold Spring Harbor Laboratory Press, New York, 1999). The viralgenes are classified into early (designated E1-E4) and late (designatedL1-L5) transcriptional units, referring to the generation of twotemporal classes of viral proteins. The demarcation of these events isviral DNA replication. The human adenoviruses are divided into numerousserotypes (approximately 47, numbered accordingly and classified into 6groups: A, B, C, D, E and F), based upon properties includinghemagglutination of red blood cells, oncogenicity, DNA and protein aminoacid compositions and homologies, and antigenic relationships.

Recombinant adenoviral vectors have several advantages for use as genedelivery vehicles, including tropism for both dividing and non-dividingcells, minimal pathogenic potential, ability to replicate to high titerfor preparation of vector stocks, and the potential to carry largeinserts (Berkner, K. L., Curr. Top. Micro. Immunol. 158:39-66, 1992;Jolly, D., Cancer Gene Therapy 1:51-64, 1994).

PAVs have been designed to take advantage of the desirable features ofadenovirus which render it a suitable vehicle for gene delivery. Whileadenoviral vectors can generally carry inserts of up to 8 kb in size bythe deletion of regions which are dispensable for viral growth, maximalcarrying capacity can be achieved with the use of adenoviral vectorscontaining deletions of most viral coding sequences, including PAVs. SeeU.S. Pat. No. 5,882,877 by Gregory et al.; Kochanek et al., Proc. Natl.Acad. Sci. USA 93:5731-5736, 1996; Parks et al., Proc. Natl. Acad. Sci.USA 93:13565-13570, 1996; Lieber et al., J. Virol. 70:8944-8960, 1996;Fisher et al., Virology 217:11-22, 1996; U.S. Pat. No. 5,670,488; PCTPublication No. WO 96/33280, published Oct. 24, 1996; PCT PublicationNo. WO 96/40955, published Dec. 19, 1996; PCT Publication No. WO97/25446, published Jul. 19, 1997; PCT Publication No. WO 95/29993,published Nov. 9, 1995; PCT Publication No. WO 97/00326, published Jan.3, 1997; Morral et al., Hum. Gene Ther. 10:2709-2716, 1998.

Since PAVs are deleted for most of the adenovirus genome, production ofPAVs requires the furnishing of adenovirus proteins in trans whichfacilitate the replication and packaging of a PAV genome into viralvector particles. Most commonly, such proteins are provided by infectinga producer cell with a helper adenovirus containing the genes encodingsuch proteins. However, such helper viruses are potential sources ofcontamination of a PAV stock during purification and can pose potentialproblems when administering the PAV to an individual if thecontaminating helper adenovirus can replicate and be packaged into viralparticles.

Accordingly, it is advantageous to increase the purity of a PAV stock byreducing or eliminating any production of helper vectors which cancontaminate preparation. Several strategies to reduce the production ofhelper vectors in the preparation of a PAV stock are disclosed in U.S.Pat. No. 5,882,877, issued Mar. 16, 1999; U.S. Pat. No. 5,670,488,issued Sep. 23, 1997 and International Patent Application No.PCT/US99/03483. For example, the helper vector may contain: (a)mutations in the packaging sequence of its genome to prevent itspackaging; (b) an oversized adenoviral genome which cannot be packageddue to size constraints of the virion; or (c) a packaging signal regionwith binding sequences that prevent access by packaging proteins to thissignal which thereby prevents production of the helper virus. Otherstrategies include the design of a helper virus with a packaging signalflanked by the excision target site of a recombinase, such as theCre-Lox system (Parks et al., Proc. Natl. Acad. Sci. USA 93:13565-13570, 1996; Hardy et al., J. Virol. 71:1842-1849, 1997). Suchhelper vectors reduce the yield of wild-type levels.

The use of adenoviruses for gene therapy is described, for example, inU.S. Pat. Nos. 6,040,174; 5,882,877; 5,824,544; 5,707,618; and5,670,488.

5.9.2 Adeno-Associated Virus (AAV)

Adeno-associated virus (AAV) is a single-stranded human DNA parvoviruswhose genome has a size about of 4.6 kb. The AAV genome contains twomajor genes: the rep gene, which codes for the rep proteins (Rep 76, Rep68, Rep 52 and Rep 40) and the cap gene, which codes for AAV structuralproteins (VP-1, VP-2 and VP-3). The rep proteins are involved in AAVreplication, rescue, transcription and integration, while the capproteins form the AAV viral particle. AAV derives its name from itsdependence on an adenovirus or other helper virus (e.g., herpesvirus) tosupply essential gene products that allow AAV to undergo a productiveinfection, i.e., reproduce itself in the host cell. In the absence ofhelper virus, AAV integrates as a provirus into the host cell'schromosome, until it is rescued by superinfection of the host cell witha helper virus, usually adenovirus (Muzyczka, 1992, Curr. Top. Micro.Immunol. 158, 97-127).

Utility of AAV as a gene transfer vector results from several uniquefeatures of its biology. At both ends of the AAV genome is a nucleotidesequence, known as an inverted terminal repeat (ITR), which contains thecis-acting nucleotide sequences required for virus replication, rescue,packaging and integration. The integration function of the ITR mediatedby the rep protein in trans permits the AAV genome to integrate into acellular chromosome after infection, in the absence of helper virus.This unique property of the virus has relevance to the use of AAV ingene transfer, as it allows for integration of a recombinant AAV (rAAV)containing a gene of interest into the cellular genome. Therefore,stable genetic transformation, ideal for many of the goals of genetransfer, may be achieved by use of rAAV vectors. Furthermore, the siteof integration for AAV is well-established and has been localized tochromosome 19 of humans (Kotin et al., Proc. Natl. Acad. Sci.87:2211-2215, 1990). This predictability of integration site reduces thedanger of random insertional events into the cellular genome that mayactivate or inactivate host genes or interrupt coding sequences,consequences that can limit the use of vectors whose integration israndom, e.g., retroviruses. However, because the rep protein mediatesthe integration of AAV, removal of this gene in the design of rAAVvectors may result in the altered integration patterns that have beenobserved with rAAV vectors (Ponnazhagan et al., Hum. Gene Ther.8:275-284, 1997).

There are other advantages to the use of AAV for gene transfer. The hostrange of AAV is broad. Moreover, unlike retroviruses, AAV can infectboth quiescent and dividing cells. In addition, AAV has not beenassociated with human disease, obviating many of the concerns that havebeen raised with retrovirus-derived gene transfer vectors.

Standard approaches to the generation of recombinant AAV vectors haverequired the coordination of a series of intracellular events:transfection of the host cell with an rAAV vector genome containing atransgene of interest flanked by the AAV ITR sequences, transfection ofthe host cell by a plasmid encoding the genes for the AAV rep and capproteins which are required in trans, and infection of the transfectedcell with a helper virus to supply the non-AAV helper functions requiredin trans (Muzyczka, N., Curr. Top. Micro. Immunol. 158: 97-129, 1992).The adenoviral (or other helper virus) proteins activate transcriptionof the AAV rep gene, and the rep proteins then activate transcription ofthe AAV cap genes. The cap proteins then utilize the ITR sequences topackage the rAAV genome into an rAAV viral particle. Therefore, theefficiency of packaging is determined, in part, by the availability ofadequate amounts of the structural proteins, as well as by theaccessibility of any cis-acting packaging sequences required in the rAAVvector genome.

One of the potential limitations to high level rAAV production derivesfrom limiting quantities of the AAV helper proteins required in transfor replication and packaging of the rAAV genome. Some approaches toincreasing the levels of these proteins have included the following:placing the AAV rep gene under the control of the HIV LTR promoter toincrease rep protein levels (Flotte, F. R. et al., Gene Therapy 2:29-37,1995); the use of other heterologous promoters to increase expression ofthe AAV helper proteins, specifically the cap proteins (Vincent et al.,J. Virol. 71:1897-1905, 1997); and the development of cell lines thatspecifically express the rep proteins (Yang, Q. et al., J. Virol. 68:4847-4856, 1994).

Other approaches to improving the production of rAAV vectors include theuse of helper virus induction of the AAV helper proteins (Clark et al.,Gene Therapy 3:1124-1132, 1996) and the generation of a cell linecontaining integrated copies of the rAAV vector and AAV helper genes sothat infection by the helper virus initiates rAAV production (Clark etal., Human Gene Therapy 6:1329-1341, 1995).

rAAV vectors have been produced using replication-defective helperadenoviruses which contain the nucleotide sequences encoding the rAAVvector genome (U.S. Pat. No. 5,856,152 issued Jan. 5, 1999) or helperadenoviruses which contain the nucleotide sequences encoding the AAVhelper proteins (PCT International Publication WO95/06743, publishedMar. 9, 1995). Production strategies which combine high level expressionof the AAV helper genes and the optimal choice of cis-acting nucleotidesequences in the rAAV vector genome have been described (PCTInternational Application No. WO97/09441 published Mar. 13, 1997).

Current approaches to reducing contamination of rAAV vector stocks byhelper viruses, therefore, involve the use of temperature-sensitivehelper viruses (Ensinger et al., J. Virol. 10:328-339, 1972), which areinactivated at the non-permissive temperature. Alternatively, thenon-AAV helper genes can be subcloned into DNA plasmids which aretransfected into a cell during rAAV vector production (Salvetti et al.,Hum. Gene Ther. 9:695-706, 1998; Grimm et al., Hum. Gene Ther.9:2745-2760, 1998).

The use of AAV for gene therapy is described, for example, in U.S. Pat.Nos. 5,753,500 and 5,962,313.

5.9.3 Retrovirus

Retrovirus vectors are a common tool for gene delivery (Miller, 1992,Nature 357, 455-460). The ability of retrovirus vectors to deliver anun-rearranged, single copy gene into a broad range of rodent, primateand human somatic cells makes retroviral vectors well suited fortransferring genes to a cell.

Retroviruses are RNA viruses wherein the viral genome is RNA. When ahost cell is infected with a retrovirus, the genomic RNA is reversetranscribed into a DNA intermediate which is integrated very efficientlyinto the chromosomal DNA of infected cells. This integrated DNAintermediate is referred to as a provirus. Transcription of the provirusand assembly into infectious virus occurs in the presence of anappropriate helper virus or in a cell line containing appropriatesequences enabling encapsidation without coincident production of acontaminating helper virus. A helper virus is not required for theproduction of the recombinant retrovirus if the sequences forencapsidation are provided by co-transfection with appropriate vectors.

Another useful tool for producing recombinant retroviral vectors is apackaging cell line which supplies in trans the proteins necessary forproducing infectious virions but which is incapable of packagingendogenous viral genomic nucleic acids (Watanabe and Temin, 1983, Molec.Cell. Biol. 3(12):2241-2249; Mann et al., 1983, Cell 33:153-159;Embretson and Temin, 1987, J. Virol. 61(9):2675-2683). One approach tominimize the likelihood of generating replication competent retrovirus(RCR) in packaging cells is to divide the packaging functions into twogenomes. For example, one genome may be used to express the gag and polgene products and the other to express the env gene product (Bosselmanet al., 1987, Molec. Cell. Biol. 7(5):1797-1806; Markowitz et al., 1988,J. Virol. 62(4):1120-1124; Danos and Mulligan, 1988, Proc. Natl. Acad.Sci. 85:6460-6464). This approach minimizes the possibility thatco-packaging and subsequent transfer of the two genomes will occur; italso significantly decreases the frequency of recombination to produceRCR due to the presence of three retroviral genomes in the packagingcell.

In the event recombinants arise, mutations (Danos and Mulligan, 1988,Id.) or deletions (Bosselman et al., 1987, Id.; Markowitz et al., 1988,Id.) can be configured within the undesired gene products to render anypossible recombinants non-functional. In addition, deletion of the 3′LTR on both packaging constructs further reduces the ability to formfunctional recombinants.

The retroviral genome and the proviral DNA have three genes: the gag,the pol, and the env, which are flanked by two long terminal repeat(LTR) sequences. The gag gene encodes the internal structural (matrix,capsid, and nucleocapsid) proteins; the pol gene encodes theRNA-directed DNA polymerase (reverse transcriptase) and the env geneencodes viral envelope glycoproteins. The 5′ and 3′ LTRs serve topromote transcription and polyadenylation of the virion RNAs. The LTRcontains all other cis-acting sequences necessary for viral replication.Adjacent to the 5′ LTR are sequences necessary for reverse transcriptionof the genome (the tRNA primer binding site) and for efficientencapsidation of viral RNA into particles (the Psi site). If thesequences necessary for encapsidation (or packaging of retroviral RNAinto infectious virions) are missing from the viral genome, the resultis a cis defect which prevents encapsidation of genomic RNA. However,the resulting mutant is still capable of directing the synthesis of allvirion proteins.

Lentiviruses are complex retroviruses which, in addition to the commonretroviral genes gag, pol and env, contain other genes with regulatoryor structural function. For example, lentiviruses may have additionalgenes including vit, vpr, tat, rev, vpu, net and vpx. The highercomplexity enables the lentivirus to modulate the life cycle, as in thecourse of latent infection. A typical lentivirus is the humanimmunodeficiency virus (HIV), the etiologic agent of AIDS. In vivo, HIVcan infect terminally differentiated cells that rarely divide, such aslymphocytes and macrophages. In vitro, HIV can infect primary culturesof monocyte-derived macrophages (MDM) as well as HeLa-Cd4 or T lymphoidcells arrested in the cell cycle by treatment with aphidicolin or gammairradiation. Infection of cells is dependent on the active nuclearimport of HIV preintegration complexes through the nuclear pores of thetarget cells. That occurs by the interaction of multiple, partlyredundant, molecular determinants in the complex with the nuclear importmachinery of the target cell. Identified determinants include afunctional nuclear localization signal (NLS) in the gag matrix (MA)protein, the karyophilic virion-associated protein, vpr, and aC-terminal phosphotyrosine residue in the gag MA protein.

The use of retroviruses for gene therapy is described, for example, inU.S. Pat. Nos. 6,013,516 and 5,994,136.

5.9.4 Non-Viral Vectors

Additional methods for delivery of DNA to cells do not use viruses fordelivery. Such methods include the use of compounds such as cationicamphiphilic compounds, non-viral ex vivo transfection, as well as DNA inthe absence of viral or non-viral compounds, known as “naked DNA.”

Because compounds designed to facilitate intracellular delivery ofbiologically active molecules must interact with both non-polar andpolar environments (in or on, for example, the plasma membrane, tissuefluids, compartments within the cell, and the biologically activemolecule itself), such compounds are designed typically to contain bothpolar and non-polar domains. Compounds having both such domains may betermed amphiphiles, and many lipids and synthetic lipids that have beendisclosed for use in facilitating such intracellular delivery (whetherfor in vitro or in vivo application) meet this definition. Oneparticularly important class of such amphiphiles is the cationicamphiphiles. In general, cationic amphiphiles have polar groups that arecapable of being positively charged at or around physiologic pH, andthis property is understood in the art to be important in defining howthe amphiphiles interact with the many types of biologically active(therapeutic) molecules including, for example, negatively chargedpolynucleotides such as DNA.

Examples of cationic amphiphilic compounds that have both polar andnon-polar domains and that are stated to be useful in relation tointracellular delivery of biologically active molecules are found, forexample, in the following references, which references also containuseful discussion of (1) the properties of such compounds that areunderstood in the art as making them suitable for such applications, and(2) the nature of the structures, as understood in the art, that areformed by complexing of such amphiphiles with therapeutic moleculesintended for intracellular delivery. Felgner, et al., Proc. Natl. Acad.Sci. USA, 84, 7413-7417 (1987) disclose use of positively-chargedsynthetic cationic lipids includingN-[1(2,3-dioleyloxy)propyl]-N,N,N-trimethylammonium chloride (“DOTMA”),to form lipid/DNA complexes suitable for transfections. See also Felgneret al., 1994, J. Biol. Chem. 269, 2550-2561. Behr et al., Proc. Natl.Acad. Sci. USA, 86, 6982-6986 (1989) disclose numerous amphiphilesincluding dioctadecylamidologlycylspermine (“DOGS”). U.S. Pat. No.5,283,185 to Epand et al. describes additional classes and species ofamphiphiles including 3β[N—(N¹, N¹-dimethylaminoethane)-carbamoyl]cholesterol, termed “DC-chol”. Additional compounds that facilitatetransport of biologically active molecules into cells are disclosed inU.S. Pat. No. 5,264,618 to Felgner et al. See also Felgner et al., 1994,J. Biol. Chem. 269, 2550-2561, for disclosure therein of furthercompounds including “DMRIE” or1,2-dimyristyloxypropyl-3-dimethyl-hydroxyethyl ammonium bromide.Reference to amphiphiles suitable for intracellular delivery ofbiologically active molecules is also found in U.S. Pat. No. 5,334,761to Gebeyehu et al., and in Felgner et al., 1993, Meth. Enzymol. 5,67-75.

The use of compositions comprising cationic amphiphilic compounds forgene delivery is described, for example, in U.S. Pat. Nos. 5,049,386;5,279,833; 5,650,096; 5,747,471; 5,757,471; 5,767,099; 5,910,487;5,719,131; 5,840,710; 5,783,565; 5,925,628; 5,912,239; 5,942,634;5,948,925; 6,022,874; 5,994,317; 5,861,397; 5,952,916; 5,948,767;5,939,401; and 5,935,936.

Another approach to gene therapy is the non-viral transfection ex vivoof a primary or secondary host cell derived from a subject to be treatedwith a DNA construct carrying the therapeutic gene. Host cellsengineered in this way are then re-introduced into the subject toadminister the gene therapy. See e.g. U.S. Pat. Nos. 5,994,127;6,048,524; 6,048,724; 6,048,729; 6,054,288; and 6,063,630.

Methods for delivering a non-infectious, non-integrating DNA sequenceencoding a desired polypeptide or peptide operably linked to a promoter,free from association with transfection-facilitating proteins, viralparticles, liposomal formulations, charged lipids and calcium phosphateprecipitating agents, is described in U.S. Pat. Nos. 5,580,859;5,963,622; and 5,910,488.

Gene transfer systems that combine viral and nonviral components havebeen developed. See Cristiano et al., 1993, Proc. Natl. Acad. Sci. USA90, 11548; Wu et al., 1994, J. Biol. Chem. 269, 11542; Wagner et al.,1992, Proc. Natl. Acad. Sci. USA 89, 6099; Yoshimura et al., 1993, J.Biol. Chem. 268, 2300; Curiel et al., 1991, Proc. Natl. Acad. Sci. USA88, 8850; Kupfer et al., 1994, Hum. Gene Ther. 5, 1437; and Gottschalket al., 1994, Gene Ther. 1, 185. In most cases, adenovirus has beenincorporated into the gene delivery systems to take advantage of itsendosomolytic properties. The reported combinations of viral andnonviral components generally involve either covalent attachment of theadenovirus to a gene delivery complex or co-internalization of unboundadenovirus with cationic lipid: DNA complexes.

5.9.5 Regulated Gene Expression

A number of systems are available to provide regulated expression of agene delivered to a subject. Any such system known to the skilledartisan may be used in a combination therapy of the invention. Examplesof such systems include but are not limited to tet-regulated vectors(see e.g. U.S. Pat. Nos. 6,004,941 and 5,866,755), RU486 gene regulationtechnology (see U.S. Pat. Nos. 5,874,534 and 5,935,934), and modifiedFK506 gene regulation technology (see U.S. Pat. Nos. 6,011,018;5,994,313; 5,871,753; 5,869,337; 5,834,266; 5,830,462; WO 96/41865; andWO 95/33052).

5.10 Enzyme Replacement Therapy

The following sections set forth specific disclosure and alternativeembodiments available for the enzyme replacement therapy component of acombination therapy of the invention.

Generally, dosage regimens for an enzyme replacement therapy componentof a combination therapy of the invention are generally determined bythe skilled clinician. Several examples of dosage regimens for thetreatment of Gaucher's disease with glucocerebrosidase were providedabove in Section 5.2. The general principles for determining a dosageregimen for any given ERT component of a combination therapy of theinvention for the treatment of any LSD will be apparent to the skilledartisan from a review of the specific references cited in the sectionswhich set forth the enabling information for each specific LSD.

Any method known in the art may be used for the manufacture of theenzymes to be used in an enzyme replacement therapy component of acombination therapy of the invention. Many such methods are known andinclude but are not limited to the Gene Activation technology developedby Transkaryotic Therapies, Inc. (see U.S. Pat. Nos. 5,968,502 and5,272,071).

5.11 Small Molecule Therapy

The following section sets forth specific disclosures and alternativeembodiments available for the small molecule therapy component of acombination therapy of the invention. Dosage regimens for a smallmolecule therapy component of a combination therapy of the invention aregenerally determined by the skilled clinician and are expected to varysignificantly depending on the particular storage disease being treatedand the clinical status of the particular affected individual. Thegeneral principles for determining a dosage regimen for a given SMTcomponent of any combination therapy of the invention for the treatmentof any storage disease are well known to the skilled artisan. Guidancefor dosage regimens can be obtained from any of the many well knownreferences in the art on this topic. Further guidance is available,inter alia, from a review of the specific references cited herein.

Generally, substrate deprivation inhibitors such as DNJ-type inhibitorsand amino ceramide-like compounds (including P4-type inhibitors) may beused in the combination therapies of the invention for treatment ofvirtually any storage disease resulting from a lesion in theglycosphingolipid pathway (e.g. Gaucher, Fabry, Sandhoff, Tay-Sachs,G_(M1)-gangliosidosis). Likewise, aminoglycosides (e.g. gentamicin,G418) may be used in the combination therapies of the invention for anystorage disease individual having a premature stop-codon mutation. Suchmutations are particularly prevalent in Hurler syndrome. A smallmolecule therapy component of a combination therapy of the invention isparticularly preferred where there is a central nervous systemmanifestation to the storage disease being treated (e.g. Sandhoff,Tay-Sachs, Niemann-Pick Type A), since small molecules can generallycross the blood-brain barrier with ease when compared to othertherapies. Moreover, derivatives of the small molecules set forth hereinare provided, wherein the derivatives have been designed by any methodknown in the art to facilitate or enhance crossing the blood-brainbarrier.

Accordingly, this invention provides small molecule therapy incombination with enzyme replacement therapy and/or gene therapy fortreatment of storage diseases. Small molecules useful in the combinationtherapies of the invention may include but are not limited to thosedescribed by Shayman and coworkers, by Aerts and coworkers, and byBedwell and coworkers in the references cited below.

Examples of amino ceramide-like compounds useful in the combinationtherapies of the invention may include but are not limited to thosedescribed in the following references: Abe et al., 2000, J. Clin.Invest. 105, 1563-1571; Abe et al., 2000, Kidney Intl 57, 446-454; Leeet al., 1999, J. Biol. Chem. 274, 14662-14669; Shayman et al., 2000,Meth. Enzymol. 31, 373-387; U.S. Pat. Nos. 5,916,911; 5,945,442;5,952,370; 6,030,995; 6,040,332 and 6,051,598. Preferred compoundsinclude but are not limited to PDMP and its derivatives, wherein PDMP is1-phenyl-2-decanoylamino-3-morpholino-1-propanol (see U.S. Pat. No.5,916,911) and P4 and its derivatives, wherein P4 isD-threo-1-phenyl-2-palmitoylamino-3-pyrrolidino-1-propanol (see Lee etal., 1999, id.). Preferred P4 derivatives includeD-threo-4′-hydroxy-1-phenyl-2-palmitoylamino-3-pyrrolidino-1-propanol(4′-hydroxy-P4),D-threo-1-(3′,4′-trimethylenedioxy)phenyl-2-palmitoylamino-3-pyrrolidino-1-propanol(trimethylenedioxy-P4),D-threo-1-(3′,4′-methylenedioxy)phenyl-2-palmitoylamino-3-pyrrolidino-1-propanol(methylenedioxy-P4) andD-threo-1-(3′,4′-ethylenedioxy)phenyl-2-palmitoylamino-3-pyrrolidino-1-propanol(ethylenedioxy-P4 or D-t-et-P4). An especially preferred P4 derivativeis ethylenedioxy-P4 (see e.g. D-t-et-P4 in FIG. 1).

Preferred dosages of P4 derivatives including D-t-et-P4 in a combinationtherapy of the invention are easily determined by the skilled artisan.Such dosages may range from 0.5 mg/kg to 50 mg/kg, preferably from 1mg/kg to 10 mg/kg by intraperitoneal or equivalent administration fromone to five times daily. Such dosages may range from 5 mg/kg to 5 g/kg,preferably from 10 mg/kg to 1 g/kg by oral or equivalent administrationfrom one to five times daily. A particularly preferred oral dose rangefor a P4-like compound is from 6 mg/kg/day to 600 mg/kg/day.

Deoxynojirimycin-like compounds and related small molecules are usefulin the combination therapies of the invention. N-butyldeoxynojirimycin(NB-DNJ or OGT 918) and derivatives thereof are preferred in combinationtherapies of the invention for treatment of storage diseases in theglycosphingolipid pathway. The use of OGT 918 alone as an oral treatmentfor Gaucher's disease has been reported by Cox et al., 2000, Lancet 355,1481-1485. OGT 918 can be used in combination therapies of the inventionfor any storage disease of the glycosphingolipid pathway, includingSandhoff and Tay-Sachs disease (see e.g. Jeyakumar et al., 2001, Blood97, 327-329; Andersson et al., 2000, Biochem. Pharmacol. 59, 821-829;Jeyakumar et al., 1999, Proc. Natl. Acad. Sci. USA 96, 6388-6393; andPlatt et al., 1997, Science 276, 428-431). Preferred deoxynojirimycinderivatives include but are not limited to N-propyldeoxynojirimycin,N-butyldeoxynojirimycin, N-butyldeoxygalactonojirimycin,N-pentlydeoxynojirimycin, N-heptyldeoxynojirimycin,N-pentanoyldeoxynojirimycin,N-(5-adamantane-1-ylmethoxy)pentyl)-deoxynojirimycin,N-(5-cholesteroxypentyl)-deoxynojirimycin,N-(4-adamantanemethanylcarboxy-1-oxo)-deoxynojirimycin,N-(4-adamantanylcarboxy-1-oxo)-deoxynojirimycin,N-(4-phenantrylcarboxy-1-oxo)-deoxynojirimycin,N-(4-cholesterylcarboxy-1-oxo)-deoxynojirimycin, orN-(4-β-cholestanylcarboxy-1-oxo)-deoxynojirimycin.

A particularly preferred deoxynojirimycin derivative for use in thecombination therapies of the invention isN-(5-adamantane-1-yl-methoxy)pentyl)-deoxynojirimycin (AMP-DNJ orAMP-DNM, see FIG. 1). AMP-DNJ is among a variety of DNJ derivativesoriginally designed as research tools to aid in the elucidation of thephysiological relevance of the non-lysosomal glucosylceramidase(Overkleeft et al., 1998, J. Biol. Chem. 273, 26522-26527). Anotherparticularly preferred deoxynojirimycin derivative for use in thecombination therapies of the invention is N-butyldeoxygalactonojirimycin(NB-DGJ), a DNJ-type inhibitor with greater selectivity (see Anderssonet al., 2000, Biochem. Pharmacol. 59, 821-829).

Preferred dosages of DNJ derivatives including NB-DNJ, NB-DGJ, AMP-DNJin a combination therapy of the invention are also readily determined bythe skilled artisan. Such dosages may range from 0.01 mg/kg to 1000mg/kg, preferably from 0.1 mg/kg to 100 mg/kg, more preferably from 1mg/kg to 10 mg/kg, by intraperitoneal or equivalent administration fromone to five times daily. Such dosages, when administered orally, mayrange from two- to twenty-fold greater. For example, OGT 918 (a.k.a.NB-DNJ) has been administered orally to humans in a 100 mg dose threetimes per day for twelve months, and a daily dose of up to 3 gm has beenused. A particularly preferred oral dose range for a DNJ-like compoundis from 60 mg/kg/day to 900 mg/kg/day.

The aminoglycosides such as gentamicin and G418 are particularly usefulin the combination therapies of the invention where the affectedindividual has a storage disease with at least one allele comprising apremature stop-codon mutation. This approach is particularly useful insome Hurler syndrome patient populations, where premature stop mutationsrepresent roughly two-thirds of the disease-causing mutations. The workby Bedwell and coworkers provides guidance for the skilled artisan inthe use of stop-mutation suppressors such as the aminoglycosides (U.S.Pat. No. 5,840,702). Aminoglycoside-induced read-through of Hurlersyndrome mutations have been described by Keeling et al., 2001, Hum.Molec. Genet. 10, 291-299. Some aminoglycosides which are preferred foruse in the combination therapies of the invention include but are notlimited to gentamicin, G418, hygromycin B, paromomycin, tobramycin andLividomycin A.

Preferred dosages of aminoglycoside derivatives including gentamicin andG418 in a combination therapy of the invention are also readilydetermined by the skilled artisan. Such dosages may range from 1 mg/kgto 1000 mg/kg, preferably from 10 mg/kg to 100 mg/kg, more preferablyfrom 5 mg/kg to 50 mg/kg, by intraperitoneal or equivalentadministration from one to five times daily. Such dosages, whenadministered orally, may range from two- to twenty-fold greater.

Any storage disease resulting at least in part from a premature stopcodon can be treated with an aminoglycoside in combination with GTand/or ERT. A number of examples of storage diseases for which prematurestop codons have been identified are provided in the followingreferences: Peltola et al., 1994, Hum. Molec. Genet. 3, 2237-2242(Aspartylglucosaminuria); Voskoboeva et al., 1994, Hum. Genet. 93,259-64 (Maroteaux-Lamy); Yang et al., 1993, Biochim. Biophys. Acta 1182,245-9 (Fucosidosis); Takahashi et al., 1992, J. Biol. Chem. 267, 12552-8(Niemann-Pick); Beutler et al., 1996, Proc. Assoc. Am. Phys. 108, 179-84(Gaucher); Hara et al., 1994, Hum. Genet. 94, 136-40 (Sandhoff); Zhanget al., 1994, Hum. Molec. Genet. 3, 139-145 (Sandhoff); Tanaka et al.,1999, J. Hum. Genet. 44, 91-5 (Tay-Sachs); Okumiya et al., 1996, Jpn. J.Hum. Genet. 41, 313-21 (Fabry); Drucker et al., 1993, Hum. Mutat. 2,415-7 (Tay-Sachs); and Sakuraba et al., 1990, Am. J. Hum. Genet. 47,784-9 (Fabry). To determine whether a storage disease individual willbenefit from a combination therapy which includes an aminoglycoside (orany other agent able to elicit read-through), the clinician simply hasthe individual genotyped to determine whether a premature stop codonmutation is present in one or more disease alleles.

5.12 Dosing Regimens & Other Considerations

Initially, gene therapy is preferred to debulk accumulated lysosomalstorage material in affected cells and organs. However, expression fromcurrently-available gene therapy vectors generally extinguishes overtime. Accordingly, gene therapy may be followed with recombinant enzymeadministration when gene expression begins to decline. ERT may becontinued, for example, until the antibody titer against the viralvector being used has abated sufficiently to allow re-dosing with genetherapy. Switching to a different gene therapy vector is also possible.Finally, both the GT and ERT phases of treatment may be supplementedwith SMT, as needed, depending on the clinical course of a given storagedisease in a given individual.

Alternatively, as expression from a gene therapy vector extinguishesover time, GT may be followed with substrate inhibition therapy (usingone or more small molecules) to abate the rate of re-accumulation ofstorage material. Depending on the rate of re-accumulation, patients canbe re-treated with gene therapy (when immune status indicators indicateit is safe to do so) or with enzyme therapy. The intervening periodbetween gene therapy and substrate inhibition and/or enzyme therapy isdictated by storage disease type and severity. Individuals which havelysosomal storage disorders that accumulate storage material slowly overtime, or those which have relatively high levels of residual enzymeactivity, will require less-frequent re-treatment with gene therapy atlonger intervals.

Enzyme therapy can also be used initially to debulk accumulatedlysosomal storage in affected cells and organs. After debulking,subjects may receive substrate inhibition therapy to abate the rate ofre-accumulation of storage material in affected lysosomes. There-accumulation rate will vary, depending on disease type and severity,and subjects can subsequently receive re-treatment with enzyme therapy,or with gene therapy, as needed as determined by the skilled clinician.

After enzyme therapy debulking, subjects may alternatively be treatedwith gene therapy which could provide therapeutic levels of enzyme forseveral months. As expression expires, subjects may return to enzymetherapy or receive substrate inhibition therapy.

A rotating combination of two of the three therapeutic platforms (i.e.gene, enzyme and substrate inhibition therapy) is preferred. However,subjects may also be treated by rotating (or overlapping) all threeapproaches as needed, as determined by the skilled clinician. Examplesof treatment schedules may include but are not limited to: (1) genetherapy, then substrate inhibition followed by enzyme therapy; (2)enzyme therapy, then substrate inhibition followed by gene therapy; (3)gene therapy, then enzyme therapy followed by substrate inhibitiontherapy; (4) enzyme therapy, then gene therapy followed by substrateinhibition therapy. As noted previously, temporal overlap of therapeuticplatforms may also be performed, as needed, depending on the clinicalcourse of a given storage disease in a given subject.

A substrate inhibition component to a combination therapy isconceptually applicable to virtually all lysosomal storage disorders.LSDs amenable to treatment by substrate inhibition with DNJ and P4 typemolecules include those of the glycosphingolipid pathway (e.g. Gaucher,Fabry, Tay-Sachs, Sandhoff and G_(M1)-gangliosidosis).

The various macromolecules that accumulate in lysosomal storage diseasesare not uniformly distributed, but instead are deposited in certainpreferred anatomic sites for each disease. However, an exogenouslysupplied enzyme, whether delivered by enzyme replacement therapy or genetherapy, is generally taken up by cells of the reticuloendothelialsystem and sorted to the lysosomal compartment where it acts tohydrolyze the accumulated substrate. Moreover, cellular uptake oftherapeutic enzyme can be augmented by certain maneuvers to increaselysosomal targeting (see e.g. U.S. Pat. No. 5,549,892 by Friedman etal., assigned to Genzyme Corporation, which describes recombinantglucocerebrosidase having improved pharmacokinetics by virtue ofremodeled oligosaccharide side chains recognized by cell surface mannosereceptors which are endocytosed and transported to lysosomes).

Treatment intervals for various combination therapies can vary widelyand may generally be different among different storage diseases anddifferent individuals depending on how aggressively storage products areaccumulated. For example, Fabry storage product accumulation may be slowcompared to rapid storage product accumulation in Pompe. Titration of aparticular storage disease in a particular individual is carried out bythe skilled artisan by monitoring the clinical signs of diseaseprogression and treatment success.

Some treatment modalities target some affected organs better thanothers. In Fabry, if ET does not reach the kidney well enough for asatisfactory clinical outcome, GT can be selectively targeted to thekidney (e.g., by injection). Other organs or disease loci such as bonesand lung alveolar macrophages may not be well targeted by ET. Using GT,however, bones can be injected and lungs can be targeted with aerosols.SMT is able to cross the BBB, providing a powerful approach, whencombined with GT and/or ERT, for treating LSDs having CNSmanifestations. Moreover, substrate deprivation by SMT combined withenzyme replacement and/or gene therapy address the storage problem atseparate and distinct intervention points which may enhance clinicaloutcome.

It will be understood that reference to simultaneous or concurrentadministration of two or more therapies does not require that they beadministered at the same time, just that they be acting in the subjectat the same time.

6. EXAMPLE

Fabry mice were used to test the in vivo efficacy of combining enzymereplacement therapy with small molecule therapy in a sequentialtreatment format (FIG. 1). The study was designed to evaluate whethersubstrate inhibition (i.e. “substrate deprivation therapy”) using smallmolecules of the DNJ and P4 types could reduce re-accumulation of thestorage material globotriaosylceramide (GB3). The study protocol (FIG.1A) called for a single infusion of α-galactosidase A enzyme to reduceGB3 levels (measured at two weeks) to a “Baseline” level in Fabry mouseliver. GB3 re-accumulation was then measured at four weeks in controlmice receiving no small molecule therapy (“Vehicle”) and in micereceiving various small molecules at various doses. Accordingly, twoweeks after GB3 levels were reduced to a “Baseline” level of about 0.1μg/g liver (FIG. 1B), a small molecule or vehicle was administered byintra-peritoneal (IP) injection. In the vehicle-treated control mice,GB3 re-accumulated to about 0.8 μg/gm liver tissue at the four week timepoint. By contrast, D-t-et-P4 (5 mg/kg) reduced GB3 re-accumulation toless than 0.4 μg/gm liver tissue at the four week time point. Similarly,AMP-DNJ (100 mg/kg) reduced GB3 re-accumulation to less than 0.3 μg/gmliver tissue at the four week time point. These results demonstrate theeffectiveness of combination therapy in a storage disease mouse model.Specifically, small molecule therapy reduced the re-accumulation ofstorage material following its reduction by enzyme replacement therapy.These results also demonstrate the unexpected benefit of combining ahydrophobic DNJ derivative (i.e. AMP-DNJ) designed as a research toolfor selective inhibition of a non-lysosomal enzyme (see (Overkleeft etal., 1998, J. Biol. Chem. 273, 26522-26527) with enzyme replacement.

The invention described and claimed herein is not to be limited in scopeby the specific embodiments herein disclosed, since these embodimentsare intended only as illustrations of several aspects of the invention.Any equivalent embodiments are intended to be within the scope of thisinvention. Indeed, various modifications of the invention in addition tothose shown and described herein will become apparent to those skilledin the art from the foregoing description. Such modifications are alsointended to fall within the scope of the appended claims. Throughoutthis application various references are cited, the contents of each ofwhich is hereby incorporated-by-reference into the present applicationin its entirety.

1-11. (canceled)
 12. A method of treatment for a subject diagnosed witha lysosomal storage disease, comprising administering a therapeuticallyeffective amount of a combination therapy, wherein the combinationtherapy comprises gene therapy and at least one of an enzyme replacementtherapy and a small molecule therapy.
 13. The method of claim 12,wherein administering at least one of enzyme replacement therapy andsmall molecule therapy comprises alternating between administration ofan enzyme replacement therapy and a small molecule therapy.
 14. Themethod of claim 12, wherein administering at least one of enzymereplacement therapy and small molecule therapy comprises simultaneouslyadministering an enzyme replacement therapy and a small moleculetherapy.
 15. The method of claim 12, wherein the lysosomal storagedisease is Gaucher's disease, Fabry disease, Pompe disease, Niemann-Pickdisease, or mucopolysaccharidosis (MPS).
 16. The method of claim 15,wherein the MPS is MPS I, MPS II, MPS IV, or MPS VI.
 17. The method ofclaim 12, wherein the gene therapy provides a therapeutically effectiveamount of a lysosomal hydrolase.
 18. The method of claim 12, wherein thegene therapy comprises administering to the subject an adeno-associatedvirus (AAV) vector encoding a lysosomal hydrolase.
 19. The method ofclaim 12, wherein the combination therapy comprises gene therapy andenzyme replacement therapy.
 20. The method of claim 19, wherein theenzyme replacement therapy comprises administering a therapeuticallyeffective amount of a lysosomal hydrolase.
 21. The method of claim 12,wherein the combination therapy comprises gene therapy and smallmolecule therapy.
 22. The method of claim 21, wherein the small moleculetherapy comprises administering to the subject a therapeuticallyeffective amount of a small molecule chosen fromD-threo-1-phenyl-2-palmitoylamino-3-pyrrolidino-1-propanol (P4) and a P4derivative.
 23. The method of claim 22, wherein the P4 derivative isD-threo-1-(3′,4′-ethylenedioxy)phenyl-2-palmitoylamino-3-pyrrolidino-1-propanol(D-t-et-P4).
 24. The method of claim 21, wherein the small moleculetherapy comprises administering to the subject a therapeuticallyeffective amount of a small molecule chosen from deoxynojirimycin (DNJ)and a DNJ derivative.
 25. The method of claim 24, wherein the DNJderivative is N-butyldeoxynojirimycin (NB-DNJ) orN-(5-adamantane-1-yl-methoxy)pentyl-deoxynojirimycin (AMP-DNJ).
 26. Amethod of treatment for a subject diagnosed as having a lysosomalstorage disease, comprising administering a therapeutically effectiveamount of a combination therapy selected from two or more of genetherapy, an enzyme replacement therapy, and a small molecule therapy.27. The method of claim 26, wherein the combination therapy comprisesadministering to the subject an adeno-associated virus (AAV) vectorencoding a lysosomal hydrolase.
 28. The method of claim 26, wherein thecombination therapy comprises administering a therapeutically effectiveamount of a lysosomal hydrolase enzyme replacement therapy.
 29. Themethod of claim 26, wherein the combination therapy comprisesadministering to the subject a therapeutically effective amount of asmall molecule chosen fromD-threo-1-phenyl-2-palmitoylamino-3-pyrrolidino-1-propanol (P4) and a P4derivative.
 30. The method of claim 29, wherein the P4 derivative isD-threo-1-(3′,4′-ethylenedioxy)phenyl-2-palmitoylamino-3-pyrrolidino-1-propanol(D-t-et-P4).
 31. The method of claim 26, wherein the combination therapycomprises administering to the subject a therapeutically effectiveamount of a small molecule chosen from deoxynojirimycin (DNJ) and a DNJderivative.
 32. The method of claim 31, wherein the DNJ derivative isN-butyldeoxynojirimycin (NB-DNJ) orN-(5-adamantane-1-yl-methoxy)pentyl-deoxynojirimycin (AMP-DNJ).
 33. Themethod of claim 26, wherein the lysosomal storage disease is Gaucher'sdisease, Fabry disease, Pompe disease, Niemann-Pick disease, ormucopolysaccharidosis (MPS).
 34. The method of claim 33, wherein the MPSis MPS I, MPS II, MPS IV, or MPS VI.